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csnk2b casein kinase 2, beta polypeptide [ Danio rerio (zebrafish) ]

Gene ID: 30428, updated on 25-Aug-2020

Summary

Official Symbol
csnk2bprovided by ZNC
Official Full Name
casein kinase 2, beta polypeptideprovided by ZNC
Primary source
ZFIN:ZDB-GENE-990415-29
See related
Ensembl:ENSDARG00000077776
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
ck2b; wu:fa16g0; wu:fa16g01
Orthologs

Genomic context

See csnk2b in Genome Data Viewer
Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (26730298..26736403, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (27146075..27152166, complement)
103 previous assembly Zv9 (GCF_000002035.4) 19 NC_007130.5 (27215963..27222055, complement)

Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene si:dkey-27c15.3 Neighboring gene protein disulfide isomerase family A, member 8 Neighboring gene proline-rich coiled-coil 2A Neighboring gene neuraminidase 1 Neighboring gene transmembrane protein 268

Genomic regions, transcripts, and products

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
kinase activity IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
protein kinase regulator activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 
transferase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 
phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
colocalizes_with PcG protein complex ISS
Inferred from Sequence or Structural Similarity
more info
 
cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
colocalizes_with nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein kinase CK2 complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
protein kinase CK2 complex IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
casein kinase II subunit beta
Names
CK II beta
casein kinase 2 beta
NP_571262.1
XP_005170056.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_131187.1NP_571262.1  casein kinase II subunit beta

    See identical proteins and their annotated locations for NP_571262.1

    Status: PROVISIONAL

    Source sequence(s)
    S76877
    UniProtKB/Swiss-Prot
    Q91398
    UniProtKB/TrEMBL
    Q1LXD2
    Related
    ENSDARP00000098474.3, ENSDART00000109258.4
    Conserved Domains (1) summary
    smart01085
    Location:8191
    CK_II_beta; Casein kinase II regulatory subunit

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007130.7 Reference GRCz11 Primary Assembly

    Range
    26730298..26736403 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005169999.4XP_005170056.1  casein kinase II subunit beta isoform X1

    See identical proteins and their annotated locations for XP_005170056.1

    UniProtKB/Swiss-Prot
    Q91398
    UniProtKB/TrEMBL
    Q1LXD2
    Related
    ENSDARP00000146410.1, ENSDART00000182802.1
    Conserved Domains (1) summary
    smart01085
    Location:8191
    CK_II_beta; Casein kinase II regulatory subunit
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