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Cfap65 cilia and flagella associated protein 65 [ Rattus norvegicus (Norway rat) ]

Gene ID: 301521, updated on 20-Jun-2026
Gene symbol
Cfap65
Gene description
cilia and flagella associated protein 65
See related
Ensembl:ENSRNOG00000056996
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Ccdc108
Expression
Biased expression in Lung (RPKM 39.4), Testes (RPKM 30.5) and 2 other tissues See more
Orthologs
all
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Try the new Transcripts and proteins table
See Cfap65 in Genome Data Viewer
Location:
9q33
Exon count:
34
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (83907882..83942812, complement)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (76459211..76494199, complement)

Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480387 Neighboring gene FEV transcription factor, ETS family member Neighboring gene crystallin, beta A2 Neighboring gene microRNA 375 Neighboring gene uncharacterized LOC102549980 Neighboring gene Indian hedgehog signaling molecule Neighboring gene nonhomologous end-joining factor 1 Neighboring gene ATP synthase membrane subunit c locus 2 like 1

Go to nucleotide: Graphics FASTA GenBank

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

GeneRIFs: Gene References Into Functions

Markers

Homology

Preferred Names
cilia and flagella associated protein 65
Names
cilia- and flagella-associated protein 65
coiled-coil domain containing 108
coiled-coil domain-containing protein 108-like

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001431252.1 → NP_001418181.1  cilia and flagella associated protein 65

    Status: VALIDATED

    Source sequence(s)
    JAXUCZ010000009
    UniProtKB/TrEMBL
    M0RBW2

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086027.1 Reference GRCr8

    Range
    83907882..83942812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039084650.2 → XP_038940578.1  cilia- and flagella-associated protein 65 isoform X5

    UniProtKB/TrEMBL
    M0RBW2
    Conserved Domains (1) summary
    cl13764
    Location:230 → 294
    ASH; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin

  2. XM_063267907.1 → XP_063123977.1  cilia- and flagella-associated protein 65 isoform X2

    UniProtKB/TrEMBL
    M0RBW2

  3. XM_063267908.1 → XP_063123978.1  

  4. XM_039084646.2 → XP_038940574.1  cilia- and flagella-associated protein 65 isoform X1

    UniProtKB/TrEMBL
    M0RBW2
    Conserved Domains (1) summary
    cl13764
    Location:280 → 344
    ASH; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin

  5. XM_039084652.2 → XP_038940580.1  cilia- and flagella-associated protein 65 isoform X6

    UniProtKB/TrEMBL
    M0RBW2
    Conserved Domains (1) summary
    cl13764
    Location:176 → 240
    ASH; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin

  6. XM_039084651.2 → XP_038940579.1  cilia- and flagella-associated protein 65 isoform X5

    UniProtKB/TrEMBL
    M0RBW2
    Conserved Domains (1) summary
    cl13764
    Location:230 → 294
    ASH; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin

  7. XM_039084645.2 → XP_038940573.1  cilia- and flagella-associated protein 65 isoform X1

    UniProtKB/TrEMBL
    M0RBW2
    Conserved Domains (1) summary
    cl13764
    Location:280 → 344
    ASH; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin

  8. XM_039084647.2 → XP_038940575.1  cilia- and flagella-associated protein 65 isoform X2

    UniProtKB/TrEMBL
    M0RBW2
    Related
    ENSRNOP00000072095.2, ENSRNOT00000077085.3
    Conserved Domains (1) summary
    cl13764
    Location:280 → 344
    ASH; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin

  9. XM_063267906.1 → XP_063123976.1  cilia- and flagella-associated protein 65 isoform X1

    UniProtKB/TrEMBL
    M0RBW2

  10. XM_039084649.2 → XP_038940577.1  cilia- and flagella-associated protein 65 isoform X4

    UniProtKB/TrEMBL
    M0RBW2
    Related
    ENSRNOP00000075199.2, ENSRNOT00000084276.3
    Conserved Domains (1) summary
    cl13764
    Location:280 → 344
    ASH; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin

  11. XM_039084653.1 → XP_038940581.1  cilia- and flagella-associated protein 65 isoform X7

    UniProtKB/TrEMBL
    M0RBW2
    Conserved Domains (1) summary
    cl13764
    Location:58 → 122
    ASH; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin

  12. XM_063267910.1 → XP_063123980.1  cilia- and flagella-associated protein 65 isoform X8

  13. XM_039084655.2 → XP_038940583.1  cilia- and flagella-associated protein 65 isoform X9

    Conserved Domains (1) summary
    cl13764
    Location:280 → 344
    ASH; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin

RNA

  1. XR_005489209.2 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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