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Timm13 translocase of inner mitochondrial membrane 13 [ Mus musculus (house mouse) ]

Gene ID: 30055, updated on 26-Sep-2022

Summary

Official Symbol
Timm13provided by MGI
Official Full Name
translocase of inner mitochondrial membrane 13provided by MGI
Primary source
MGI:MGI:1353432
See related
Ensembl:ENSMUSG00000020219 AllianceGenome:MGI:1353432
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Tim9; Timm9; D10Ertd378e
Summary
Predicted to enable metal ion binding activity. Predicted to be involved in protein insertion into mitochondrial inner membrane. Predicted to act upstream of or within protein transport. Located in mitochondrion. Is expressed in genitourinary system. Orthologous to human TIMM13 (translocase of inner mitochondrial membrane 13). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in kidney adult (RPKM 57.7), liver adult (RPKM 49.8) and 28 other tissues See more
Orthologs
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Genomic context

See Timm13 in Genome Data Viewer
Location:
10 C1; 10 39.72 cM
Exon count:
3
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 10 NC_000076.7 (80735284..80736803, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 10 NC_000076.6 (80899450..80900969, complement)

Chromosome 10 - NC_000076.7Genomic Context describing neighboring genes Neighboring gene LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated Neighboring gene signal peptide peptidase like 2B Neighboring gene transmembrane protease, serine 9 Neighboring gene lamin B2 Neighboring gene growth arrest and DNA-damage-inducible 45 beta

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in protein insertion into mitochondrial inner membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in fibrillar center ISO
Inferred from Sequence Orthology
more info
 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrial intermembrane space IEA
Inferred from Electronic Annotation
more info
 
part_of mitochondrial intermembrane space protein transporter complex IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
part_of mitochondrial intermembrane space protein transporter complex ISO
Inferred from Sequence Orthology
more info
 
located_in mitochondrion HDA PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
mitochondrial import inner membrane translocase subunit Tim13
Names
translocase of inner mitochondrial membrane 13 homolog
translocase of inner mitochondrial membrane 9 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013895.4NP_038923.1  mitochondrial import inner membrane translocase subunit Tim13

    See identical proteins and their annotated locations for NP_038923.1

    Status: VALIDATED

    Source sequence(s)
    AF144702, AK013230
    Consensus CDS
    CCDS35989.1
    UniProtKB/Swiss-Prot
    P62075
    UniProtKB/TrEMBL
    A0A6P5QJ82
    Related
    ENSMUSP00000020440.7, ENSMUST00000020440.7
    Conserved Domains (1) summary
    pfam02953
    Location:2484
    zf-Tim10_DDP; Tim10/DDP family zinc finger

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000076.7 Reference GRCm39 C57BL/6J

    Range
    80735284..80736803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)