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Tomm22 translocase of outer mitochondrial membrane 22 [ Rattus norvegicus (Norway rat) ]

Gene ID: 300075, updated on 2-Oct-2018

Summary

Official Symbol
Tomm22provided by RGD
Official Full Name
translocase of outer mitochondrial membrane 22provided by RGD
Primary source
RGD:1303260
See related
Ensembl:ENSRNOG00000014058 Vega:OTTRNOG00000000738
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
TOM22; rTOM22
Expression
Biased expression in Thymus (RPKM 483.7), Heart (RPKM 470.4) and 9 other tissues See more
Orthologs

Genomic context

See Tomm22 in Genome Data Viewer
Location:
7q34
Exon count:
4
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (120901934..120903684)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 7 NC_005106.3 (120888909..120894057)

Chromosome 7 - NC_005106.4Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 227, member A Neighboring gene chibby family member 1, beta catenin antagonist Neighboring gene Josephin domain containing 1 Neighboring gene GTP binding protein 1

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Pathways from BioSystems

General gene information

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
protein transmembrane transporter activity IMP
Inferred from Mutant Phenotype
more info
PubMed 
Process Evidence Code Pubs
positive regulation of apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein import into mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 
protein import into mitochondrial outer membrane ISO
Inferred from Sequence Orthology
more info
 
protein insertion into mitochondrial membrane IMP
Inferred from Mutant Phenotype
more info
PubMed 
protein transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane ISO
Inferred from Sequence Orthology
more info
 
mitochondrial outer membrane translocase complex IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrial outer membrane translocase complex ISO
Inferred from Sequence Orthology
more info
 
mitochondrion IDA
Inferred from Direct Assay
more info
PubMed 
mitochondrion ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
mitochondrial import receptor subunit TOM22 homolog
Names
translocase of outer membrane 22 kDa subunit homolog
translocase of outer mitochondrial membrane 22 homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_212514.2NP_997679.1  mitochondrial import receptor subunit TOM22 homolog

    See identical proteins and their annotated locations for NP_997679.1

    Status: PROVISIONAL

    Source sequence(s)
    BC098639
    UniProtKB/Swiss-Prot
    Q75Q41
    Related
    ENSRNOP00000019323.3, OTTRNOP00000000549, ENSRNOT00000019323.5, OTTRNOT00000001082

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005106.4 Reference Rnor_6.0 Primary Assembly

    Range
    120901934..120903684
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Rn_Celera

Genomic

  1. AC_000075.1 Alternate Rn_Celera

    Range
    107557387..107559137
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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