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Nek9 NIMA-related kinase 9 [ Rattus norvegicus (Norway rat) ]

Gene ID: 299204, updated on 22-Aug-2021

Summary

Official Symbol
Nek9provided by RGD
Official Full Name
NIMA-related kinase 9provided by RGD
Primary source
RGD:1307187
See related
Ensembl:ENSRNOG00000058572
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Adrenal (RPKM 248.2), Muscle (RPKM 242.4) and 9 other tissues See more
Orthologs
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Genomic context

See Nek9 in Genome Data Viewer
Location:
6q31
Exon count:
22
Annotation release Status Assembly Chr Location
108 current mRatBN7.2 (GCF_015227675.2) 6 NC_051341.1 (104944056..104984538, complement)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 6 NC_005105.4 (109121524..109162433, complement)

Chromosome 6 - NC_051341.1Genomic Context describing neighboring genes Neighboring gene acylphosphatase 1 Neighboring gene zinc finger, C2HC-type containing 1C Neighboring gene uncharacterized LOC102549675 Neighboring gene transmembrane p24 trafficking protein 10 Neighboring gene uncharacterized LOC120103578 Neighboring gene 40S ribosomal protein S28 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

General gene information

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 
enables protein kinase binding ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
colocalizes_with centrosome ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
serine/threonine-protein kinase Nek9
Names
NIMA (never in mitosis gene a)- related kinase 9
NP_001100217.2
XP_038967977.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001106747.2NP_001100217.2  serine/threonine-protein kinase Nek9

    Status: VALIDATED

    Source sequence(s)
    JACYVU010000166
    Conserved Domains (2) summary
    COG5184
    Location:344687
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    cd08221
    Location:50297
    STKc_Nek9; Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 9

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 108 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mRatBN7.2 Primary Assembly

Genomic

  1. NC_051341.1 Reference mRatBN7.2 Primary Assembly

    Range
    104944056..104984538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039112049.1XP_038967977.1  serine/threonine-protein kinase Nek9 isoform X1

    Conserved Domains (2) summary
    COG5184
    Location:344670
    ATS1; Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]
    cd08221
    Location:50297
    STKc_Nek9; Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 9
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