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FAM216A family with sequence similarity 216 member A [ Homo sapiens (human) ]

Gene ID: 29902, updated on 1-Jun-2020

Summary

Official Symbol
FAM216Aprovided by HGNC
Official Full Name
family with sequence similarity 216 member Aprovided by HGNC
Primary source
HGNC:HGNC:30180
See related
Ensembl:ENSG00000204856
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C12orf24; HSU79274
Expression
Biased expression in testis (RPKM 25.9), brain (RPKM 7.8) and 12 other tissues See more
Orthologs

Genomic context

See FAM216A in Genome Data Viewer
Location:
12q24.11
Exon count:
9
Annotation release Status Assembly Chr Location
109.20200522 current GRCh38.p13 (GCF_000001405.39) 12 NC_000012.12 (110468413..110490385)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (110906232..110928192)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene actin related protein 2/3 complex subunit 3 Neighboring gene GPN-loop GTPase 3 Neighboring gene ribosomal protein L31 pseudogene 49 Neighboring gene VPS29 retromer complex component Neighboring gene RAD9 checkpoint clamp component B Neighboring gene protein phosphatase targeting COQ7 Neighboring gene HNF4 motif-containing MPRA enhancer 250

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

General protein information

Preferred Names
protein FAM216A
Names
protein predicted by clone 23733
uncharacterized protein C12orf24

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_013300.3NP_037432.2  protein FAM216A

    See identical proteins and their annotated locations for NP_037432.2

    Status: VALIDATED

    Source sequence(s)
    AK225731
    Consensus CDS
    CCDS31899.1
    UniProtKB/Swiss-Prot
    Q8WUB2
    Related
    ENSP00000366901.5, ENST00000377673.10
    Conserved Domains (1) summary
    pfam15107
    Location:73175
    FAM216B; FAM216B protein family

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p13 Primary Assembly

    Range
    110468413..110490385
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005253875.5XP_005253932.1  protein FAM216A isoform X2

    Conserved Domains (1) summary
    pfam15107
    Location:181
    FAM216B; FAM216B protein family
  2. XM_024448959.1XP_024304727.1  protein FAM216A isoform X2

    Conserved Domains (1) summary
    pfam15107
    Location:181
    FAM216B; FAM216B protein family
  3. XM_011538246.3XP_011536548.1  protein FAM216A isoform X1

    Conserved Domains (1) summary
    pfam15107
    Location:34136
    FAM216B; FAM216B protein family
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