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Gtse1 G two S phase expressed protein 1 [ Mus musculus (house mouse) ]

Gene ID: 29870, updated on 30-Apr-2024

Summary

Official Symbol
Gtse1provided by MGI
Official Full Name
G two S phase expressed protein 1provided by MGI
Primary source
MGI:MGI:1352755
See related
Ensembl:ENSMUSG00000022385 AllianceGenome:MGI:1352755
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
B99; Gtse-1
Summary
Predicted to enable microtubule binding activity. Predicted to be located in cytoplasm and microtubule. Predicted to be active in cytoplasmic microtubule. Orthologous to human GTSE1 (G2 and S-phase expressed 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Broad expression in liver E14.5 (RPKM 14.6), thymus adult (RPKM 14.1) and 21 other tissues See more
Orthologs
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Genomic context

See Gtse1 in Genome Data Viewer
Location:
15 E2; 15 40.42 cM
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (85743928..85760774)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (85859691..85876573)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene polycystin (PKD) family receptor for egg jelly Neighboring gene tetratricopeptide repeat domain 38 Neighboring gene STARR-seq mESC enhancer starr_39401 Neighboring gene STARR-positive B cell enhancer ABC_E4144 Neighboring gene STARR-positive B cell enhancer ABC_E10874 Neighboring gene tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase Neighboring gene cadherin, EGF LAG seven-pass G-type receptor 1 Neighboring gene STARR-seq mESC enhancer starr_39409

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (2) 

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables microtubule binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
is_active_in cytoplasmic microtubule IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in cytoplasmic microtubule ISO
Inferred from Sequence Orthology
more info
 
located_in cytoskeleton IEA
Inferred from Electronic Annotation
more info
 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 
is_active_in microtubule cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
G2 and S phase-expressed protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001168672.2NP_001162143.1  G2 and S phase-expressed protein 1

    See identical proteins and their annotated locations for NP_001162143.1

    Status: VALIDATED

    Source sequence(s)
    AC139513
    Consensus CDS
    CCDS27725.1
    UniProtKB/Swiss-Prot
    O89015, Q8R080, Q9CSG9
    UniProtKB/TrEMBL
    Q542Q3
    Related
    ENSMUSP00000128759.2, ENSMUST00000170629.3
    Conserved Domains (1) summary
    pfam15259
    Location:10153
    GTSE1_N; G-2 and S-phase expressed 1
  2. NM_013882.3NP_038910.1  G2 and S phase-expressed protein 1

    See identical proteins and their annotated locations for NP_038910.1

    Status: VALIDATED

    Source sequence(s)
    AC139513
    Consensus CDS
    CCDS27725.1
    UniProtKB/Swiss-Prot
    O89015, Q8R080, Q9CSG9
    UniProtKB/TrEMBL
    Q542Q3
    Related
    ENSMUSP00000155552.2, ENSMUST00000231074.2
    Conserved Domains (1) summary
    pfam15259
    Location:10153
    GTSE1_N; G-2 and S-phase expressed 1

RNA

  1. NR_177978.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC139513

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    85743928..85760774
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)