Format

Send to:

Choose Destination

Myoz2 myozenin 2 [ Rattus norvegicus (Norway rat) ]

Gene ID: 295426, updated on 21-Jul-2018

Summary

Official Symbol
Myoz2provided by RGD
Official Full Name
myozenin 2provided by RGD
Primary source
RGD:1307669
See related
Ensembl:ENSRNOG00000014815
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Expression
Biased expression in Heart (RPKM 4796.9) and Muscle (RPKM 1617.3) See more
Orthologs

Genomic context

See Myoz2 in Genome Data Viewer
Location:
2q42
Exon count:
7
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 2 NC_005101.4 (227180887..227207629, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 2 NC_005101.3 (246542267..246569008, complement)

Chromosome 2 - NC_005101.4Genomic Context describing neighboring genes Neighboring gene hypothetical protein LOC691807 Neighboring gene ubiquitin specific peptidase 53 Neighboring gene similar to amphoretin-induced gene and ORF Neighboring gene synaptopodin 2

Genomic regions, transcripts, and products

Expression

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Bibliography

General gene information

Markers

Homology

Gene Ontology Provided by RGD

Function Evidence Code Pubs
FATZ binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
actin binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
actin binding ISO
Inferred from Sequence Orthology
more info
 
telethonin binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
telethonin binding ISO
Inferred from Sequence Orthology
more info
 
Component Evidence Code Pubs
Z disc IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Z disc ISO
Inferred from Sequence Orthology
more info
 
actin cytoskeleton IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
actin cytoskeleton ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
myozenin-2
Names
calsarcin-1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001106469.1NP_001099939.1  myozenin-2

    Status: PROVISIONAL

    Source sequence(s)
    CH473952
    UniProtKB/TrEMBL
    D3ZX18
    Related
    ENSRNOP00000063607.1, ENSRNOT00000065361.1
    Conserved Domains (1) summary
    pfam05556
    Location:29185
    Calsarcin; Calcineurin-binding protein (Calsarcin)

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005101.4 Reference Rnor_6.0 Primary Assembly

    Range
    227180887..227207629 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006233264.2XP_006233326.1  myozenin-2 isoform X1

    UniProtKB/TrEMBL
    A0A0G2KAQ5
    Related
    ENSRNOP00000075487.1, ENSRNOT00000080215.1
    Conserved Domains (1) summary
    pfam05556
    Location:1264
    Calsarcin; Calcineurin-binding protein (Calsarcin)
  2. XM_017590785.1XP_017446274.1  myozenin-2 isoform X2

Alternate Rn_Celera

Genomic

  1. AC_000070.1 Alternate Rn_Celera

    Range
    203570719..203596880 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center