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Ms4a6bl1 membrane-spanning 4-domains, subfamily A, member 6B-like 1 [ Rattus norvegicus (Norway rat) ]

Gene ID: 293749, updated on 5-Feb-2026
Official Symbol
Ms4a6bl1provided by RGD
Official Full Name
membrane-spanning 4-domains, subfamily A, member 6B-like 1provided by RGD
Primary source
RGD:1359381
See related
Ensembl:ENSRNOG00000050395 AllianceGenome:RGD:1359381
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
Ms4a6b; Ms4a6e; Ms4a6bl
Summary
Predicted to be located in membrane. [provided by Alliance of Genome Resources, Apr 2025]
Expression
Biased expression in Spleen (RPKM 469.3), Thymus (RPKM 221.1) and 7 other tissues See more
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Try the new Transcripts and proteins table
See Ms4a6bl1 in Genome Data Viewer
Location:
1q43
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (217668326..217680151)
RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (208243561..208255400)
106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (227240419..227252244)

Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134484918 Neighboring gene membrane-spanning 4-domains, subfamily A, member 4C like 1 Neighboring gene membrane-spanning 4-domains, subfamily A, member 6B Neighboring gene uncharacterized LOC102551452

Go to nucleotide: Graphics FASTA GenBank

  • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
  • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
  • BioProject: PRJNA238328
  • Publication: PMID 24510058
  • Analysis date: Mon Jun 6 17:44:12 2016

Related articles in PubMed

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

Markers

Homology

Clone Names

  • MGC94557

Gene Ontology Provided by RGD

Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in trans-Golgi network IBA
Inferred from Biological aspect of Ancestor
more info
  
Preferred Names
membrane-spanning 4-domains, subfamily A, member 6B-like 1
Names
membrane spanning 4-domains A6E
membrane-spanning 4-domains, subfamily A, member 6B
membrane-spanning 4-domains, subfamily A, member 6E

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001006975.1 → NP_001006976.1  membrane-spanning 4-domains, subfamily A, member 6B-like 1

    See identical proteins and their annotated locations for NP_001006976.1

    Status: PROVISIONAL

    Source sequence(s)
    BC083691
    UniProtKB/TrEMBL
    A0A8I6A366, A6I096, Q5XIJ0
    Related
    ENSRNOP00000085807.1, ENSRNOT00000096650.2
    Conserved Domains (1) summary
    pfam04103
    Location:47 → 207
    CD20; CD20-like family

RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCr8

Genomic

  1. NC_086019.1 Reference GRCr8

    Range
    217668326..217680151
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039108673.2 → XP_038964601.1  membrane-spanning 4-domains, subfamily A, member 6B-like 1 isoform X1

    Conserved Domains (1) summary
    pfam04103
    Location:23 → 136
    CD20; CD20-like family
Nucleotide Protein Strain
Heading Accession and Version

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