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spsL putative dTDP-4-deoxyrhamnose-3,5-epimerase (cell surface and spore coat) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 2914201, updated on 12-Feb-2021

Summary

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Gene symbol
spsL
Gene description
putative dTDP-4-deoxyrhamnose-3,5-epimerase (cell surface and spore coat)
Locus tag
BSU_37810
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU37810
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Genomic context

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Sequence:
NC_000964.3 (3882979..3883434, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene glutamate dehydrogenase Neighboring gene biofilm protein, member of the processed secretome contributing to biofilm hydrophobicity Neighboring gene putative dTDP-4-dehydrorhamnose reductase Neighboring gene dTDP-glucose 4,6-dehydratase Neighboring gene glucose-1-phosphate thymidylyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
putative dTDP-4-deoxyrhamnose-3,5-epimerase (cell surface and spore coat)
YP_054595.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 25239894; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3882979..3883434 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_054595.1 putative dTDP-4-deoxyrhamnose-3,5-epimerase (cell surface and spore coat) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for YP_054595.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    COG1898
    Location:1 → 151
    RfbC; dTDP-4-dehydrorhamnose 3,5-epimerase or related enzyme [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q7WY56.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases