Format

Send to:

Choose Destination

Nkapl NFKB activating protein-like [ Rattus norvegicus (Norway rat) ]

Gene ID: 291165, updated on 13-Aug-2019

Summary

Official Symbol
Nkaplprovided by RGD
Official Full Name
NFKB activating protein-likeprovided by RGD
Primary source
RGD:1311667
See related
Ensembl:ENSRNOG00000056708
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Rattus norvegicus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
Also known as
RGD1311667

Genomic context

See Nkapl in Genome Data Viewer
Location:
17p11
Exon count:
1
Annotation release Status Assembly Chr Location
106 current Rnor_6.0 (GCF_000001895.5) 17 NC_005116.4 (45175254..45176771)
106 current Rn_Celera (GCF_000002265.2) 17 AC_000085.1 (53331504..53333021, complement)
104 previous assembly Rnor_5.0 (GCF_000001895.4) 17 NC_005116.3 (58291326..58292843, complement)

Chromosome 17 - NC_005116.4Genomic Context describing neighboring genes Neighboring gene zinc finger with KRAB and SCAN domains 8 Neighboring gene zinc finger with KRAB and SCAN domains 4 Neighboring gene zinc finger and SCAN domain containing 26 Neighboring gene microRNA 1896 Neighboring gene piggyBac transposable element derived 1

Genomic regions, transcripts, and products

Pathways from PubChem

General gene information

Homology

Clone Names

  • MGC114538

Gene Ontology Provided by RGD

Function Evidence Code Pubs
chromatin binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 
negative regulation of transcription, DNA-templated IEA
Inferred from Electronic Annotation
more info
 

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001029913.1NP_001025084.1  NKAP-like protein

    See identical proteins and their annotated locations for NP_001025084.1

    Status: PROVISIONAL

    Source sequence(s)
    BC097473
    UniProtKB/TrEMBL
    Q4QR70
    Related
    ENSRNOP00000074151.1, ENSRNOT00000080417.1
    Conserved Domains (2) summary
    pfam06047
    Location:286387
    SynMuv_product; Ras-induced vulval development antagonizt
    pfam15692
    Location:110170
    NKAP; NF-kappa-B-activating protein

RefSeqs of Annotated Genomes: Rattus norvegicus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Rnor_6.0 Primary Assembly

Genomic

  1. NC_005116.4 Reference Rnor_6.0 Primary Assembly

    Range
    45175254..45176771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate Rn_Celera

Genomic

  1. AC_000085.1 Alternate Rn_Celera

    Range
    53331504..53333021 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center