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LGALSL galectin like [ Homo sapiens (human) ]

Gene ID: 29094, updated on 7-Dec-2018

Summary

Official Symbol
LGALSLprovided by HGNC
Official Full Name
galectin likeprovided by HGNC
Primary source
HGNC:HGNC:25012
See related
Ensembl:ENSG00000119862 MIM:617902
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GRP; HSPC159
Expression
Broad expression in skin (RPKM 47.6), esophagus (RPKM 15.3) and 22 other tissues See more
Orthologs

Genomic context

See LGALSL in Genome Data Viewer
Location:
2p14
Exon count:
5
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 2 NC_000002.12 (64454193..64461383)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (64681327..64688517)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374768 Neighboring gene microRNA 4433b Neighboring gene microRNA 4433a Neighboring gene ribosomal protein L23a pseudogene 37 Neighboring gene LGALSL divergent transcript Neighboring gene long intergenic non-protein coding RNA 1805 Neighboring gene uncharacterized LOC105374773 Neighboring gene uncharacterized LOC101927402

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC33751, MGC71953

Gene Ontology Provided by GOA

Function Evidence Code Pubs
carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
galectin-related protein
Names
galectin-like protein
lectin galactoside-binding-like protein
lectin, galactoside binding like

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_014181.3NP_054900.2  galectin-related protein

    See identical proteins and their annotated locations for NP_054900.2

    Status: VALIDATED

    Source sequence(s)
    AC008074, AK025603, BC036082, BC062691, DR001728
    Consensus CDS
    CCDS1877.1
    UniProtKB/Swiss-Prot
    Q3ZCW2
    Related
    ENSP00000238875.4, ENST00000238875.9
    Conserved Domains (1) summary
    smart00908
    Location:46170
    Gal-bind_lectin; Galactoside-binding lectin

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p12 Primary Assembly

    Range
    64454193..64461383
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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