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C19orf53 chromosome 19 open reading frame 53 [ Homo sapiens (human) ]

Gene ID: 28974, updated on 13-Mar-2020

Summary

Official Symbol
C19orf53provided by HGNC
Official Full Name
chromosome 19 open reading frame 53provided by HGNC
Primary source
HGNC:HGNC:24991
See related
Ensembl:ENSG00000104979
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
LYDG10; HSPC023
Expression
Ubiquitous expression in ovary (RPKM 36.1), heart (RPKM 32.6) and 25 other tissues See more
Orthologs

Genomic context

See C19orf53 in Genome Data Viewer
Location:
19p13.13
Exon count:
3
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (13774456..13778773)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (13885257..13889587)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 130 Neighboring gene methylthioribose-1-phosphate isomerase 1 Neighboring gene zinc finger SWIM-type containing 4 Neighboring gene uncharacterized LOC107985334 Neighboring gene RNA, 7SL, cytoplasmic 619, pseudogene Neighboring gene uncharacterized LOC284454 Neighboring gene microRNA 24-2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

General protein information

Preferred Names
leydig cell tumor 10 kDa protein homolog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_014047.3NP_054766.1  leydig cell tumor 10 kDa protein homolog

    See identical proteins and their annotated locations for NP_054766.1

    Status: VALIDATED

    Source sequence(s)
    AC008686, AI689503, BC015465, DA768829
    Consensus CDS
    CCDS12298.1
    UniProtKB/Swiss-Prot
    Q9UNZ5
    Related
    ENSP00000465432.1, ENST00000588234.6
    Conserved Domains (1) summary
    pfam09495
    Location:172
    DUF2462; Protein of unknown function (DUF2462)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    13774456..13778773
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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