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SDHB succinate dehydrogenase complex iron sulfur subunit B [ Bos taurus (cattle) ]

Gene ID: 286840, updated on 9-Jun-2019

Summary

Official Symbol
SDHBprovided by VGNC
Official Full Name
succinate dehydrogenase complex iron sulfur subunit Bprovided by VGNC
Primary source
VGNC:VGNC:34391
See related
BGD:BT27935; Ensembl:ENSBTAG00000008314
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Cetartiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs

Genomic context

See SDHB in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
106 current ARS-UCD1.2 (GCF_002263795.1) 2 NC_037329.1 (135549091..135578116)
105 previous assembly Bos_taurus_UMD_3.1.1 (GCF_000003055.6) 2 AC_000159.1 (136125304..136154371)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112443488 Neighboring gene peptidyl arginine deiminase 2 Neighboring gene uncharacterized LOC101903997 Neighboring gene ATPase cation transporting 13A2

Genomic regions, transcripts, and products

Pathways from BioSystems

General gene information

Markers

Homology

  • Homologs of the SDHB gene: The SDHB gene is conserved in human, chimpanzee, Rhesus monkey, dog, mouse, rat, chicken, zebrafish, fruit fly, mosquito, C.elegans, S.cerevisiae, K.lactis, E.gossypii, S.pombe, M.oryzae, N.crassa, A.thaliana, rice, and frog.
  • Orthologs from Annotation Pipeline: 229 organisms have orthologs with human gene SDHB
  • Orthologs

Clone Names

  • MGC127046

Gene Ontology Provided by GOA

Function Evidence Code Pubs
2 iron, 2 sulfur cluster binding ISS
Inferred from Sequence or Structural Similarity
more info
 
3 iron, 4 sulfur cluster binding ISS
Inferred from Sequence or Structural Similarity
more info
 
4 iron, 4 sulfur cluster binding ISS
Inferred from Sequence or Structural Similarity
more info
 
electron transfer activity IEA
Inferred from Electronic Annotation
more info
 
metal ion binding IEA
Inferred from Electronic Annotation
more info
 
succinate dehydrogenase (ubiquinone) activity IEA
Inferred from Electronic Annotation
more info
 
ubiquinone binding ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
tricarboxylic acid cycle IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
mitochondrial inner membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial
Names
IP
iron-sulfur subunit of complex II
succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
NP_001035573.1
XP_015315535.1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001040483.1NP_001035573.1  succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial precursor

    See identical proteins and their annotated locations for NP_001035573.1

    Status: PROVISIONAL

    Source sequence(s)
    BC102067
    UniProtKB/Swiss-Prot
    Q3T189
    Related
    ENSBTAP00000062851.1, ENSBTAT00000072816.1
    Conserved Domains (3) summary
    PLN00129
    Location:1271
    PLN00129; succinate dehydrogenase [ubiquinone] iron-sulfur subunit
    pfam13085
    Location:41147
    Fer2_3; 2Fe-2S iron-sulfur cluster binding domain
    pfam13534
    Location:185258
    Fer4_17; 4Fe-4S dicluster domain

RefSeqs of Annotated Genomes: Bos taurus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD1.2 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD1.2 Primary Assembly

    Range
    135549091..135578116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015460049.1XP_015315535.1  succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial isoform X1

    Related
    ENSBTAP00000010949.4, ENSBTAT00000010949.4
    Conserved Domains (3) summary
    PRK05950
    Location:23254
    sdhB; succinate dehydrogenase iron-sulfur subunit; Reviewed
    pfam13085
    Location:23129
    Fer2_3; 2Fe-2S iron-sulfur cluster binding domain
    pfam13534
    Location:167240
    Fer4_17; 4Fe-4S dicluster domain
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