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TRARG1 trafficking regulator of GLUT4 (SLC2A4) 1 [ Homo sapiens (human) ]

Gene ID: 286753, updated on 25-Nov-2021

Summary

Official Symbol
TRARG1provided by HGNC
Official Full Name
trafficking regulator of GLUT4 (SLC2A4) 1provided by HGNC
Primary source
HGNC:HGNC:29592
See related
Ensembl:ENSG00000184811 MIM:612211
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
BEC-1; DSPB1; LOST1; TUSC5; IFITMD3
Expression
Restricted expression toward fat (RPKM 61.1) See more
Orthologs
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Genomic context

See TRARG1 in Genome Data Viewer
Location:
17p13.3
Exon count:
3
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (1279662..1300978)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (1182956..1204272)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984980 Neighboring gene basic helix-loop-helix family member a9 Neighboring gene Sharpr-MPRA regulatory region 14526 Neighboring gene tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein epsilon Neighboring gene Sharpr-MPRA regulatory region 4720 Neighboring gene CRK proto-oncogene, adaptor protein

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in cellular response to insulin stimulus ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in endosome to plasma membrane protein transport ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in glucose import in response to insulin stimulus ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in protein localization to plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
involved_in vesicle fusion to plasma membrane IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasmic vesicle membrane ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in perinuclear region of cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane ISS
Inferred from Sequence or Structural Similarity
more info
 

General protein information

Preferred Names
trafficking regulator of GLUT4 1
Names
brain endothelial cell derived gene-1
dispanin subfamily B member 1
interferon induced transmembrane protein domain containing 3
interferon-induced transmembrane domain-containing protein D3
located at seventeen p thirteen point three 1
protein located at seventeen-p-thirteen point three 1
tumor suppressor candidate 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_172367.3NP_758955.2  trafficking regulator of GLUT4 1

    See identical proteins and their annotated locations for NP_758955.2

    Status: VALIDATED

    Source sequence(s)
    AC032044
    Consensus CDS
    CCDS42225.1
    UniProtKB/Swiss-Prot
    Q8IXB3
    Related
    ENSP00000329548.3, ENST00000333813.4
    Conserved Domains (1) summary
    pfam04505
    Location:92140
    CD225; Interferon-induced transmembrane protein

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    1279662..1300978
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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