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FAM133A family with sequence similarity 133 member A [ Homo sapiens (human) ]

Gene ID: 286499, updated on 17-Sep-2022

Summary

Official Symbol
FAM133Aprovided by HGNC
Official Full Name
family with sequence similarity 133 member Aprovided by HGNC
Primary source
HGNC:HGNC:26748
See related
Ensembl:ENSG00000179083 AllianceGenome:HGNC:26748
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
CT115
Expression
Biased expression in testis (RPKM 2.8), brain (RPKM 1.0) and 2 other tissues See more
Orthologs
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Genomic context

See FAM133A in Genome Data Viewer
Location:
Xq21.32
Exon count:
9
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (93673681..93712265)
110 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (92119376..92157407)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (92929205..92967264)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ribosomal protein L7 pseudogene 55 Neighboring gene nucleosome assembly protein 1 like 3 Neighboring gene USP37 pseudogene 1 Neighboring gene RNA, U6 small nuclear 332, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ37659

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
protein FAM133A
Names
cancer/testis antigen 115

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_016400.1 RefSeqGene

    Range
    5194..43253
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001171109.2NP_001164580.1  protein FAM133A

    See identical proteins and their annotated locations for NP_001164580.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same protein.
    Source sequence(s)
    AL009173, DA414074
    Consensus CDS
    CCDS14466.1
    UniProtKB/Swiss-Prot
    Q8N9E0
    Related
    ENSP00000507109.1, ENST00000683942.1
  2. NM_001171110.2NP_001164581.1  protein FAM133A

    See identical proteins and their annotated locations for NP_001164581.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript. Variants 1, 2, 3 and 4 encode the same protein.
    Source sequence(s)
    AL009173, DA188870
    Consensus CDS
    CCDS14466.1
    UniProtKB/Swiss-Prot
    Q8N9E0
  3. NM_001171111.2NP_001164582.1  protein FAM133A

    See identical proteins and their annotated locations for NP_001164582.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same protein.
    Source sequence(s)
    AL009173, DB084469
    Consensus CDS
    CCDS14466.1
    UniProtKB/Swiss-Prot
    Q8N9E0
    Related
    ENSP00000318974.4, ENST00000322139.4
  4. NM_173698.3NP_775969.1  protein FAM133A

    See identical proteins and their annotated locations for NP_775969.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Variants 1, 2, 3 and 4 encode the same protein.
    Source sequence(s)
    AL009173, DA297338
    Consensus CDS
    CCDS14466.1
    UniProtKB/Swiss-Prot
    Q8N9E0
    Related
    ENSP00000362169.1, ENST00000332647.5

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    93673681..93712265
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011530926.4XP_011529228.1  protein FAM133A isoform X1

    See identical proteins and their annotated locations for XP_011529228.1

    UniProtKB/Swiss-Prot
    Q8N9E0
  2. XM_011530927.3XP_011529229.1  protein FAM133A isoform X1

    See identical proteins and their annotated locations for XP_011529229.1

    UniProtKB/Swiss-Prot
    Q8N9E0
  3. XM_011530929.2XP_011529231.1  protein FAM133A isoform X1

    See identical proteins and their annotated locations for XP_011529231.1

    UniProtKB/Swiss-Prot
    Q8N9E0
  4. XM_017029454.2XP_016884943.1  protein FAM133A isoform X1

    UniProtKB/Swiss-Prot
    Q8N9E0
  5. XM_017029455.2XP_016884944.1  protein FAM133A isoform X1

    UniProtKB/Swiss-Prot
    Q8N9E0
  6. XM_011530928.2XP_011529230.1  protein FAM133A isoform X1

    See identical proteins and their annotated locations for XP_011529230.1

    UniProtKB/Swiss-Prot
    Q8N9E0
  7. XM_011530925.3XP_011529227.1  protein FAM133A isoform X1

    See identical proteins and their annotated locations for XP_011529227.1

    UniProtKB/Swiss-Prot
    Q8N9E0
  8. XM_017029456.2XP_016884945.1  protein FAM133A isoform X1

    UniProtKB/Swiss-Prot
    Q8N9E0
  9. XM_006724641.4XP_006724704.1  protein FAM133A isoform X1

    See identical proteins and their annotated locations for XP_006724704.1

    UniProtKB/Swiss-Prot
    Q8N9E0
  10. XM_011530931.3XP_011529233.1  protein FAM133A isoform X1

    See identical proteins and their annotated locations for XP_011529233.1

    UniProtKB/Swiss-Prot
    Q8N9E0

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    92119376..92157407
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)