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LINC00632 long intergenic non-protein coding RNA 632 [ Homo sapiens (human) ]

Gene ID: 286411, updated on 22-Sep-2021

Summary

Official Symbol
LINC00632provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 632provided by HGNC
Primary source
HGNC:HGNC:27865
See related
Ensembl:ENSG00000203930
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ASINC
Expression
Biased expression in brain (RPKM 3.1), fat (RPKM 0.6) and 2 other tissues See more
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Genomic context

See LINC00632 in Genome Data Viewer
Location:
Xq27.1
Exon count:
5
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) X NC_000023.11 (140709759..140772677)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (139791924..139854842)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373344 Neighboring gene uncharacterized LOC101928833 Neighboring gene cerebellar degeneration related protein 1 Neighboring gene microRNA 320d-2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_028344.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AK054978, BQ343502, DA082671, DB307877
    Related
    ENST00000370535.8
  2. NR_028345.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon and its 3' terminal exon extends past a splice site used in variant 1, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    DA128399, DA529197
  3. NR_104228.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks an exon and contains two alternate 3' exons, resulting in a shorter transcript, compared to variant 1.
    Source sequence(s)
    AL078639, BM811380, DA082671
    Related
    ENST00000498732.7
  4. NR_173139.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL078639, AL844175
  5. NR_173140.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL078639, AL844175
  6. NR_173141.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL078639
  7. NR_173142.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL078639
  8. NR_173143.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL078639
  9. NR_173144.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL078639, AL844175

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p13 Primary Assembly

    Range
    140709759..140772677
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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