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SAR0331 hypothetical protein [ Staphylococcus aureus subsp. aureus MRSA252 ]

Gene ID: 2861656, discontinued on 3-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
SAR0331
Gene description
hypothetical protein
Locus tag
SAR0331
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Staphylococcus aureus subsp. aureus MRSA252 (strain: MRSA252, sub-species: aureus MRSA252)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus
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Genomic Sequence:
NC_002952.2

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 376628-376696,
    , 376724-376792,
    , 376853-376921,
    , 376964-377032,
    , 377069-377137,
    , 377150-377218,
    , 377306-377374,
    , 377417-377485,
    , 377522-377590,
    , 377633-377701,
    , 377735-377803,
    , 377813-377881 12 probable transmembrane helices predicted for SAR0331 by TMHMM2.0 at aa 20-42, 52-74, 95-117, 132-154, 167-189, 194-216, 246-268, 283-305, 318-340, 355-377, 389-411 and 415-437
  • Loc: 376637-377125 Pfam match to entry PF01554 UPF0013, Uncharacterized membrane protein family UPF0013, score 94.90, E-value 1.6e-24
  • Loc: 376949-376996 PS00038 Myc-type, 'helix-loop-helix' dimerization domain signature.
  • Loc: 377303-377785 Pfam match to entry PF01554 UPF0013, Uncharacterized membrane protein family UPF0013, score 53.30, E-value 5.5e-12
Names
hypothetical protein
YP_039790.1
  • Similar to Lactococcus lactis hypothetical protein YpbC TR:Q9CFJ2 (EMBL:AE006378) (459 aa) fasta scores: E(): 9.6e-53, 38.636% id in 440 aa, and to Thermotoga maritima conserved hypothetical protein TM1701 TR:Q9X227 (EMBL:AE001810) (458 aa) fasta scores: E(): 1.4e-27, 29.787% id in 423 aa

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002952.2 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_039790.1 hypothetical protein SAR0331 [Staphylococcus aureus subsp. aureus MRSA252]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GJY2.1