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cap8J capsular polysaccharide synthesis enzyme [ Staphylococcus aureus subsp. aureus MRSA252 ]

Gene ID: 2861338, discontinued on 3-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
cap8J
Gene description
capsular polysaccharide synthesis enzyme
Locus tag
SAR0160
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Staphylococcus aureus subsp. aureus MRSA252 (strain: MRSA252, sub-species: aureus MRSA252)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus
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Genomic Sequence:
NC_002952.2

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 178660-178713 Pfam match to entry PF00132 hexapep, Bacterial transferase hexapeptide (four repeats), score 8.30, E-value 68
  • Loc: 178759-178812 Pfam match to entry PF00132 hexapep, Bacterial transferase hexapeptide (four repeats), score 11.20, E-value 24
  • Loc: 178813-178866 Pfam match to entry PF00132 hexapep, Bacterial transferase hexapeptide (four repeats), score 11.80, E-value 16
Names
capsular polysaccharide synthesis enzyme
YP_039625.1
  • Identical to aureus capsular polysaccharide synthesis enzyme Cap8J TR:P72376 (EMBL:U73374) (185 aa) fasta scores: E(): 7.2e-73, 100.000% id in 185 aa. C_terminal region is similar to the C-terminus of Vibrio cholerae probable galactoside-O-acetyl transferase WblB TR:O87158 (EMBL:AB012957) (161 aa) fasta scores: E(): 4.6e-10, 38.333% id in 120 aa

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002952.2 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_039625.1 capsular polysaccharide synthesis enzyme [Staphylococcus aureus subsp. aureus MRSA252]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GKE7.1