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ZFP41 ZFP41 zinc finger protein [ Homo sapiens (human) ]

Gene ID: 286128, updated on 23-Nov-2021

Summary

Official Symbol
ZFP41provided by HGNC
Official Full Name
ZFP41 zinc finger proteinprovided by HGNC
Primary source
HGNC:HGNC:26786
See related
Ensembl:ENSG00000181638
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ZNF753; zfp-41
Expression
Ubiquitous expression in testis (RPKM 2.9), ovary (RPKM 2.1) and 25 other tissues See more
Orthologs
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Genomic context

See ZFP41 in Genome Data Viewer
Location:
8q24.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 8 NC_000008.11 (143246939..143262705)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (144329109..144344875)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986906 Neighboring gene glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1 Neighboring gene GLI family zinc finger 4 Neighboring gene MYC-induced long non-coding RNA

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Potential readthrough

Included gene: GLI4

Homology

Clone Names

  • FLJ00028, FLJ38705, DKFZp761O1618

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in spermatogenesis IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
zinc finger protein 41 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001271156.3NP_001258085.3  zinc finger protein 41 homolog

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC138696, BC034608, DA216172
    Consensus CDS
    CCDS6397.2
    Related
    ENSP00000430465.3, ENST00000520584.6
    Conserved Domains (3) summary
    COG5048
    Location:85198
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:117137
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl25751
    Location:872
    DUF4045; Domain of unknown function (DUF4045)
  2. NM_173832.6NP_776193.3  zinc finger protein 41 homolog

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    AC138696, AK096024, AW576245, CR992458, DA216172, KF458885
    Consensus CDS
    CCDS6397.2
    Related
    ENSP00000327427.6, ENST00000330701.7
    Conserved Domains (3) summary
    COG5048
    Location:85198
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:117137
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl25751
    Location:872
    DUF4045; Domain of unknown function (DUF4045)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p13 Primary Assembly

    Range
    143246939..143262705
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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