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SAR1620 hypothetical protein [ Staphylococcus aureus subsp. aureus MRSA252 ]

Gene ID: 2860856, discontinued on 3-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
SAR1620
Gene description
hypothetical protein
Locus tag
SAR1620
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Staphylococcus aureus subsp. aureus MRSA252 (strain: MRSA252, sub-species: aureus MRSA252)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus
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Genomic Sequence:
NC_002952.2

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c1690191-1689943 Pfam match to entry PF00482 GSPII_F, Bacterial type II secretion system protein F domain, score 21.50, E-value 2.6e-05
  • Loc: c1690629-1690561, ~, c1690494-1690426, ~, c1690017-1689949 3 probable transmembrane helices predicted for SAR1620 by TMHMM2.0 at aa 123-145, 168-190 and 327-349
  • Loc: c1690710-1690510 Pfam match to entry PF00482 GSPII_F, Bacterial type II secretion system protein F domain, score 29.30, E-value 1.5e-07
Names
hypothetical protein
YP_041016.1
  • Similar to Bacillus subtilis comG operon protein 2 ComG2 SW:CMGB_BACSU (P25954) (323 aa) fasta scores: E(): 6.2e-21, 24.138% id in 319 aa, and to Pseudomonas putida type 4 fimbrial assembly protein PilC SW:PILC_PSEPU (P36641) (401 aa) fasta scores: E(): 1.7e-11, 23.907% id in 343 aa

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002952.2 Reference assembly

    Range
    1689925..1690995 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_041016.1 hypothetical protein SAR1620 [Staphylococcus aureus subsp. aureus MRSA252]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GGF6.1