U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SAR0109 transporter protein [ Staphylococcus aureus subsp. aureus MRSA252 ]

Gene ID: 2860811, discontinued on 3-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
SAR0109
Gene description
transporter protein
Locus tag
SAR0109
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Staphylococcus aureus subsp. aureus MRSA252 (strain: MRSA252, sub-species: aureus MRSA252)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus
NEW
Try the new Gene table
Try the new Transcript table
Genomic Sequence:
NC_002952.2

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 115204-115263,
    , 115321-115389,
    , 115423-115491,
    , 115501-115554,
    , 115591-115659,
    , 115669-115728,
    , 115786-115854,
    , 115864-115923,
    , 115984-116052,
    , 116068-116136,
    , 116173-116232,
    , 116242-116310,
    , 116392-116460,
    , 116473-116541 14 probable transmembrane helices predicted for SAR0109 by TMHMM2.0 at aa 7-26, 46-68, 80-102, 106-123, 136-158, 162-181, 201-223, 227-246, 267-289, 295-317, 330-349, 353-375, 403-425 and 430-452
  • Loc: 115216-116550 Pfam match to entry PF00083 sugar_tr, Sugar (and other) transporter, score -130.40, E-value 0.038
  • Loc: 116239-116301 PS00079 Multicopper oxidases signature 1.
Names
transporter protein
YP_039573.1
  • Similar to Streptomyces virginiae virginiamycin S resistance protein VarS TR:Q9XE01 (EMBL:AB019519) (518 aa) fasta scores: E(): 3.6e-23, 26.957% id in 460 aa, and to Streptomyces coelicolor transmembrane efflux protein SCH10.26C TR:Q9X8R5 (EMBL:AL049754) (484 aa) fasta scores: E(): 5.6e-24, 27.115% id in 461 aa. Similar to SAR1448, 71.082% identity (71.082% ungapped) in 453 aa overlap and SAR2534, 59.913% identity (60.706% ungapped) in 459 aa overlap

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002952.2 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_039573.1 transporter protein [Staphylococcus aureus subsp. aureus MRSA252]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GKJ9.1