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arlS sensor kinase [ Staphylococcus aureus subsp. aureus MRSA252 ]

Gene ID: 2859859, discontinued on 3-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
arlS
Gene description
sensor kinase
Locus tag
SAR1426
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Staphylococcus aureus subsp. aureus MRSA252 (strain: MRSA252, sub-species: aureus MRSA252)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus
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Genomic Sequence:
NC_002952.2

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c1486639-1486313 Pfam match to entry PF02518 HATPase_c, Histidine kinase-, DNA gyrase B-, phytochrome-like ATPase, score 126.50, E-value 4.9e-34
  • Loc: c1486972-1486769 Pfam match to entry PF00512 signal, His Kinase A (phosphoacceptor) domain, score 70.50, E-value 3.5e-17
  • Loc: c1487194-1486982 Pfam match to entry PF00672 HAMP, HAMP domain, score 36.40, E-value 6.4e-07
  • Loc: c1487638-1487570, ~, c1487206-1487138 2 probable transmembrane helices predicted for SAR1426 by TMHMM2.0 at aa 10-32 and 154-176
Names
sensor kinase
YP_040828.1
  • Two-component regulatory system family, sensor kinase. Previously sequenced as Staphylococcus aureus protein histidine kinase ArlS TR:Q9KJN3 (EMBL:AF165314) (451 aa) fasta scores: E(): 1.6e-154, 99.778% id in 451 aa. Similar to Listeria monocytogenes histidine kinase homologue LisK TR:Q9RPY9 (EMBL:AF139908) (483 aa) fasta scores: E(): 9.4e-43, 35.118% id in 467 aa

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002952.2 Reference assembly

    Range
    1486310..1487665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_040828.1 sensor kinase [Staphylococcus aureus subsp. aureus MRSA252]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GGZ4.1