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arcD arginine/ornithine antiporter [ Staphylococcus aureus subsp. aureus MRSA252 ]

Gene ID: 2859851, discontinued on 3-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
arcD
Gene description
arginine/ornithine antiporter
Locus tag
SAR2712
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Staphylococcus aureus subsp. aureus MRSA252 (strain: MRSA252, sub-species: aureus MRSA252)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus
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Genomic Sequence:
NC_002952.2

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: c2808232-2808176,
    , c2808157-2808089,
    , c2808046-2807978,
    , c2807974-2807906,
    , c2807893-2807834,
    , c2807800-2807732,
    , c2807644-2807585,
    , c2807548-2807480,
    , c2807437-2807369,
    , c2807269-2807201,
    , c2807191-2807123,
    , c2807074-2807021,
    , c2807008-2806955,
    , c2806918-2806850 14 probable transmembrane helices predicted for SAR2712 by TMHMM2.0 at aa 15-33, 40-62, 77-99, 101-123, 128-147, 159-181, 211-230, 243-265, 280-302, 336-358, 362-384, 401-418, 423-440 and 453-475
  • Loc: c2808244-2806862 Pfam match to entry PF00324 aa_permeases, Amino acid permease, score -232.50, E-value 0.00047
Names
arginine/ornithine antiporter
YP_042054.1
  • Similar to Pseudomonas aeruginosa arginine/ornithine antiporter ArcD SW:ARCD_PSEAE (P18275) (482 aa) fasta scores: E(): 7.8e-77, 46.2% id in 487 aa, and to Bacillus licheniformis permease ArcD TR:O86133 (EMBL:Y17554) (468 aa) fasta scores: E(): 1.2e-99, 59.23% id in 471 aa

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002952.2 Reference assembly

    Range
    2806838..2808274 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_042054.1 arginine/ornithine antiporter [Staphylococcus aureus subsp. aureus MRSA252]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GDG9.1