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ZNF775 zinc finger protein 775 [ Homo sapiens (human) ]

Gene ID: 285971, updated on 5-Aug-2022

Summary

Official Symbol
ZNF775provided by HGNC
Official Full Name
zinc finger protein 775provided by HGNC
Primary source
HGNC:HGNC:28501
See related
Ensembl:ENSG00000196456 AllianceGenome:HGNC:28501
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in colon (RPKM 2.3), brain (RPKM 1.7) and 24 other tissues See more
Orthologs
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Genomic context

See ZNF775 in Genome Data Viewer
Location:
7q36.1
Exon count:
5
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (150379330..150398630)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (151557672..151576951)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (150076419..150095718)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986858 Neighboring gene REPIN1 antisense RNA 1 Neighboring gene replication initiator 1 Neighboring gene ZNF775 antisense RNA 1 Neighboring gene zinc finger domain-containing protein LOC728743 Neighboring gene uncharacterized LOC124901773

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • MGC33584

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173680.4NP_775951.2  zinc finger protein 775

    See identical proteins and their annotated locations for NP_775951.2

    Status: VALIDATED

    Source sequence(s)
    AC073111, AW402889, BC015152, DB472309
    Consensus CDS
    CCDS43678.1
    UniProtKB/Swiss-Prot
    Q8IY24, Q96BV0
    Related
    ENSP00000330838.5, ENST00000329630.10
    Conserved Domains (3) summary
    COG5048
    Location:275524
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:448468
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:121146
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    150379330..150398630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_047420221.1XP_047276177.1  zinc finger protein 775 isoform X1

  2. XM_047420224.1XP_047276180.1  zinc finger protein 775 isoform X2

    UniProtKB/Swiss-Prot
    Q8IY24
  3. XM_047420222.1XP_047276178.1  zinc finger protein 775 isoform X1

  4. XM_047420223.1XP_047276179.1  zinc finger protein 775 isoform X1

  5. XM_047420220.1XP_047276176.1  zinc finger protein 775 isoform X1

  6. XM_047420225.1XP_047276181.1  zinc finger protein 775 isoform X3

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    151557672..151576951
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)