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clpB ATPase of an ATP-dependent protease [ Staphylococcus aureus subsp. aureus MRSA252 ]

Gene ID: 2859233, discontinued on 3-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:
Gene symbol
clpB
Gene description
ATPase of an ATP-dependent protease
Locus tag
SAR0938
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Staphylococcus aureus subsp. aureus MRSA252 (strain: MRSA252, sub-species: aureus MRSA252)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus
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Genomic Sequence:
NC_002952.2

Go to nucleotide: Graphics FASTA GenBank

GeneRIFs: Gene References Into Functions

Miscellaneous features

  • Loc: 980575-980733 Pfam match to entry PF02861 Clp_N, Clp amino terminal domain, score 23.60, E-value 0.0046
  • Loc: 980812-980958 Pfam match to entry PF02861 Clp_N, Clp amino terminal domain, score 19.30, E-value 0.022
  • Loc: 981124-981708 Pfam match to entry PF00004 AAA, ATPase associated with various cellular activities (AAA), score 41.80, E-value 1.5e-08
  • Loc: 981139-981162 PS00017 ATP/GTP-binding site motif A (P-loop).
  • Loc: 981403-981441 PS00870 Chaperonins clpA/B signature 1.
  • Loc: 982336-983034 Pfam match to entry PF00004 AAA, ATPase associated with various cellular activities (AAA), score 2.10, E-value 0.0019
  • Loc: 982351-982374 PS00017 ATP/GTP-binding site motif A (P-loop).
  • Loc: 982429-982485 PS00871 Chaperonins clpA/B signature 2.
Names
ATPase of an ATP-dependent protease
YP_040360.1
  • Similar to Escherichia coli ATPase subunit of an ATP-dependent protease, and heat shock protein, ClpB SW:CLPB_ECOLI (P03815) (857 aa) fasta scores: E(): 1.5e-128, 52.723% id in 863 aa, and to Lactococcus lactis ClpB homologue TR:Q9CFF3 (EMBL:AE006383) (867 aa) fasta scores: E(): 2.4e-156, 60.596% id in 873 aa. Contains coiled-coiled domain, residues 440 to 485

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002952.2 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_040360.1 ATPase of an ATP-dependent protease [Staphylococcus aureus subsp. aureus MRSA252]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GIB2.1