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SAR2542 transport protein [ Staphylococcus aureus subsp. aureus MRSA252 ]

Gene ID: 2859192, discontinued on 3-Feb-2015
  • All Gene records for this genome have been discontinued due to a change in scope for prokaryotic genomes in Gene. At the time this Gene record was discontinued, the RefSeq genome was re-annotated with the following features at this location:

Summary

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Gene symbol
SAR2542
Gene description
transport protein
Locus tag
SAR2542
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Staphylococcus aureus subsp. aureus MRSA252 (strain: MRSA252, sub-species: aureus MRSA252)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_002952.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: c2624157-2624089,
    , c2624061-2623996,
    , c2623959-2623891,
    , c2623878-2623810,
    , c2623791-2623723,
    , c2623713-2623645,
    , c2623536-2623468,
    , c2623440-2623372,
    , c2623335-2623267,
    , c2623086-2623027 10 probable transmembrane helices predicted for SAR2542 by TMHMM2.0 at aa 7-29, 39-60, 73-95, 100-122, 129-151, 155-177, 214-236, 246-268, 281-303 and 364-383
  • Loc: c2624175-2623000 Pfam match to entry PF00083 sugar_tr, Sugar (and other) transporter, score -72.80, E-value 0.00035

General protein information

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Names
transport protein
YP_041893.1
  • Similar to Pseudomonas aeruginosa probable MFS transporter PA3303 TR:Q9HYU1 (EMBL:AE004752) (391 aa) fasta scores: E(): 1.8e-29, 33.05% id in 363 aa, and to Bacillus subtilis hypothetical protein YdhL TR:O05504 (EMBL:D88802) (425 aa) fasta scores: E(): 1e-28, 30.76% id in 377 aa

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_002952.2 Reference assembly

    Range
    2622988..2624175 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_041893.1 transport protein [Staphylococcus aureus subsp. aureus MRSA252]

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q6GDY0.1