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LINC02112 long intergenic non-protein coding RNA 2112 [ Homo sapiens (human) ]

Gene ID: 285692, updated on 23-Nov-2021

Summary

Official Symbol
LINC02112provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2112provided by HGNC
Primary source
HGNC:HGNC:27756
See related
Ensembl:ENSG00000249781
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.8) See more
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Genomic context

See LINC02112 in Genome Data Viewer
Location:
5p15.31-p15.2
Exon count:
13
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 5 NC_000005.10 (9641315..9903824, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (9641427..9903936, complement)

Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA, C/D box 123 Neighboring gene uncharacterized LOC101929359 Neighboring gene small nucleolar RNA host gene 18 Neighboring gene taste 2 receptor member 1 Neighboring gene uncharacterized LOC105374649 Neighboring gene RNA, 5S ribosomal pseudogene 177 Neighboring gene long intergenic non-protein coding RNA 2221 Neighboring gene uncharacterized LOC107986405 Neighboring gene ATP synthase c subunit lysine N-methyltransferase

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Genome-wide association study of HLA-DQB1*06:02 negative essential hypersomnia.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027112.2 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC026787, AC091838, AC091958
    Related
    ENST00000511616.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000005.10 Reference GRCh38.p13 Primary Assembly

    Range
    9641315..9903824 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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