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YIPF7 Yip1 domain family member 7 [ Homo sapiens (human) ]

Gene ID: 285525, updated on 10-Dec-2019

Summary

Official Symbol
YIPF7provided by HGNC
Official Full Name
Yip1 domain family member 7provided by HGNC
Primary source
HGNC:HGNC:26825
See related
Ensembl:ENSG00000177752
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
FinGER9
Expression
Low expression observed in reference dataset See more
Orthologs

Genomic context

See YIPF7 in Genome Data Viewer
Location:
4p12
Exon count:
7
Annotation release Status Assembly Chr Location
109.20191205 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (44619578..44656868, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (44624354..44653658, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 2475 Neighboring gene potassium channel tetramerization domain containing 8 Neighboring gene uncharacterized LOC107986275 Neighboring gene uncharacterized LOC105374439 Neighboring gene GUF1 homolog, GTPase Neighboring gene glucosamine-6-phosphate deaminase 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Clone Names

  • FLJ39576, MGC120164

Gene Ontology Provided by GOA

Component Evidence Code Pubs
Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 
integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
protein YIPF7
Names
YIP1 family member 7
five-pass transmembrane protein localizing in the Golgi apparatus and the endoplasmic reticulum 9

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_182592.2NP_872398.2  protein YIPF7

    See identical proteins and their annotated locations for NP_872398.2

    Status: VALIDATED

    Source sequence(s)
    AK096895, BC103996, DB299886
    Consensus CDS
    CCDS54766.1
    UniProtKB/Swiss-Prot
    Q8N8F6
    Related
    ENSP00000332772.5, ENST00000332990.5
    Conserved Domains (1) summary
    cl21557
    Location:73280
    Yip1; Yip1 domain

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    44619578..44656868 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011513679.2XP_011511981.1  protein YIPF7 isoform X1

    Conserved Domains (1) summary
    cl21557
    Location:111318
    Yip1; Yip1 domain
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