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CTBP1-AS CTBP1 antisense RNA [ Homo sapiens (human) ]

Gene ID: 285463, updated on 12-Jun-2022

Summary

Official Symbol
CTBP1-ASprovided by HGNC
Official Full Name
CTBP1 antisense RNAprovided by HGNC
Primary source
HGNC:HGNC:48337
See related
Ensembl:ENSG00000280927 AllianceGenome:HGNC:48337
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PCAT10
Expression
Ubiquitous expression in duodenum (RPKM 7.9), spleen (RPKM 7.5) and 25 other tissues See more
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Genomic context

See CTBP1-AS in Genome Data Viewer
Location:
4p16.3
Exon count:
6
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (1210120..1218591)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (1209315..1217754)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (1203908..1212379)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene nascent polypeptide-associated complex subunit alpha, muscle-specific form-like Neighboring gene hornerin-like Neighboring gene spondin 2 Neighboring gene uncharacterized LOC100130872 Neighboring gene uncharacterized LOC124900164 Neighboring gene C-terminal binding protein 1 Neighboring gene CTBP1 divergent transcript Neighboring gene uncharacterized LOC105374347 Neighboring gene uncharacterized LOC105374346

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Other Names

  • prostate cancer associated transcript 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_104331.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC092535, AK092548
    Related
    ENST00000625256.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    1210120..1218591
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    1209315..1217754
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)