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F11-AS1 F11 antisense RNA 1 [ Homo sapiens (human) ]

Gene ID: 285441, updated on 11-Jun-2021

Summary

Official Symbol
F11-AS1provided by HGNC
Official Full Name
F11 antisense RNA 1provided by HGNC
Primary source
HGNC:HGNC:27725
See related
Ensembl:ENSG00000251165
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in liver (RPKM 14.0), testis (RPKM 8.5) and 5 other tissues See more
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Genomic context

See F11-AS1 in Genome Data Viewer
Location:
4q35.2
Exon count:
10
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 4 NC_000004.12 (186286098..186501058, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (187207252..187422212, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene cytochrome P450 family 4 subfamily V member 2 Neighboring gene kallikrein B1 Neighboring gene coagulation factor XI Neighboring gene solute carrier family 25 member 5 pseudogene 6 Neighboring gene uncharacterized LOC105377596 Neighboring gene RNA, U6 small nuclear 1055, pseudogene Neighboring gene melatonin receptor 1A

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

Associated conditions

Description Tests
Genetic associations for activated partial thromboplastin time and prothrombin time, their gene expression profiles, and risk of coronary artery disease.
GeneReviews: Not available
Genome-wide association of lipid-lowering response to statins in combined study populations.
GeneReviews: Not available
Genome-wide pharmacogenomic study of citalopram-induced side effects in STAR*D.
GeneReviews: Not available

General gene information

Markers

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_033900.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks six exons and includes three alternate exons, compared to variant 2.
    Source sequence(s)
    AC110771, BC034307, DB023800
    Related
    ENST00000505103.5
  2. NR_033901.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC018709, BC038717, DB023800, DB336253, DB516619, KF459882
    Related
    ENST00000508110.5

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p13 Primary Assembly

    Range
    186286098..186501058 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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