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LOC284933 uncharacterized LOC284933 [ Homo sapiens (human) ]

Gene ID: 284933, updated on 10-Oct-2023

Summary

Gene symbol
LOC284933
Gene description
uncharacterized LOC284933
See related
Ensembl:ENSG00000281732
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.5) See more
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Genomic context

See LOC284933 in Genome Data Viewer
Location:
22q13.32
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (48538900..48547387, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (49031374..49039850, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (48934712..48943199, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105373081 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48765615-48766210 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48772420-48772926 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48772927-48773431 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48792732-48793724 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48810064-48810602 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48810603-48811140 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48819797-48820788 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48828944-48829484 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48831787-48832288 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19276 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr22:48841523-48842722 Neighboring gene uncharacterized LOC124905142 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48887443-48887948 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48890918-48891778 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48892641-48893500 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48895067-48895980 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48902339-48903338 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48906445-48907385 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48907386-48908325 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48911142-48911882 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48918523-48919026 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48923229-48923730 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48923731-48924230 Neighboring gene TAFA chemokine like family member 5 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48929759-48930260 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48930261-48930760 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48933150-48933964 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:48943879-48944378 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:48953988-48954215 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48955380-48956268 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48956269-48957157 Neighboring gene uncharacterized LOC124900480 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:48972958-48973464 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49001381-49002302 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49024390-49025219 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49025220-49026048 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49026049-49026878 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49030484-49031058 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49031059-49031631 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49036799-49037318 Neighboring gene ReSE screen-validated silencer GRCh37_chr22:49043107-49043284 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49062165-49062666 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49062667-49063166 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49064778-49065430 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_63485 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_63487 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49096987-49097494 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49097495-49098002 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr22:49107619-49108118 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49113659-49114248 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr22:49114249-49114838 Neighboring gene microRNA 4535

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038917.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AW663221, BC036359, Z84468
    Related
    ENST00000626321.1

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    48538900..48547387 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    49031374..49039850 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)