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LINC02891 long intergenic non-protein coding RNA 2891 [ Homo sapiens (human) ]

Gene ID: 284865, updated on 13-May-2022

Summary

Official Symbol
LINC02891provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 2891provided by HGNC
Primary source
HGNC:HGNC:55221
See related
Ensembl:ENSG00000249923 AllianceGenome:HGNC:55221
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
lnc-RTN4R-1
Expression
Biased expression in duodenum (RPKM 1.5), spleen (RPKM 0.2) and 3 other tissues See more
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Genomic context

See LINC02891 in Genome Data Viewer
Location:
22q11.21
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 22 NC_000022.11 (20198729..20204918, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 22 NC_060946.1 (20578441..20584631, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 22 NC_000022.10 (20186252..20192441, complement)

Chromosome 22 - NC_000022.11Genomic Context describing neighboring genes Neighboring gene enhancer-blocking element 22-3 upstream of CCDC188 Neighboring gene CRISPRi-validated cis-regulatory element chr22.431 Neighboring gene uncharacterized LOC105372862 Neighboring gene long intergenic non-protein coding RNA 896 Neighboring gene uncharacterized LOC124905083

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_038460.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC007663, AK092552
    Related
    ENST00000506039.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000022.11 Reference GRCh38.p14 Primary Assembly

    Range
    20198729..20204918 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060946.1 Alternate T2T-CHM13v2.0

    Range
    20578441..20584631 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)