U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC284788 uncharacterized LOC284788 [ Homo sapiens (human) ]

Gene ID: 284788, updated on 13-May-2022

Summary

Gene symbol
LOC284788
Gene description
uncharacterized LOC284788
See related
Ensembl:ENSG00000204684
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 1.2) See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC284788 in Genome Data Viewer
Location:
20p11.21
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (22400333..22420643, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (22457882..22478213, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (22380971..22401281, complement)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1427 Neighboring gene Sharpr-MPRA regulatory region 5495 Neighboring gene VISTA enhancer hs2547 Neighboring gene FOXA motif-containing MPRA enhancer 246 Neighboring gene uncharacterized LOC105372562

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027089.2 RNA Sequence

    Status: PREDICTED

    Description
    Transcript Variant: This variant (1) is the longer transcript.
    Source sequence(s)
    BC033532, KF456862
    Related
    ENST00000377121.1
  2. NR_027090.1 RNA Sequence

    Status: PREDICTED

    Description
    Transcript Variant: This variant (2) omits an exon compared to variant 1.
    Source sequence(s)
    BC033532, BC144090
    Related
    ENST00000664479.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    22400333..22420643 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    22457882..22478213 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)