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C20orf204 chromosome 20 open reading frame 204 [ Homo sapiens (human) ]

Gene ID: 284739, updated on 23-Nov-2021

Summary

Official Symbol
C20orf204provided by HGNC
Official Full Name
chromosome 20 open reading frame 204provided by HGNC
Primary source
HGNC:HGNC:27655
See related
Ensembl:ENSG00000196421
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
PRR17; LINC00176; NCRNA00176
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See C20orf204 in Genome Data Viewer
Location:
20q13.33
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 20 NC_000020.11 (64033709..64039001)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (62665062..62670354)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene Sharpr-MPRA regulatory region 2003 Neighboring gene sterile alpha motif domain containing 10 Neighboring gene pre-mRNA processing factor 6 Neighboring gene SOX18 promoter region Neighboring gene transcription elongation factor A2 Neighboring gene SRY-box transcription factor 18 Neighboring gene regulator of G protein signaling 19 Neighboring gene microRNA 6813

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

General gene information

Markers

Homology

Clone Names

  • FLJ17673, FLJ27267, DKFZp434G015

General protein information

Preferred Names
uncharacterized protein C20orf204
Names
long intergenic non-protein coding RNA 176
proline rich 17
putative proline-rich protein 17

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001348090.2NP_001335019.1  uncharacterized protein C20orf204 precursor

    Status: VALIDATED

    Source sequence(s)
    AL355803
    Consensus CDS
    CCDS86971.1
    UniProtKB/TrEMBL
    A0A1B0GTL2
  2. NM_001387010.1NP_001373939.1  uncharacterized protein C20orf204 precursor

    Status: VALIDATED

    Source sequence(s)
    AL355803
    Related
    ENSP00000489747.1, ENST00000636176.2

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p13 Primary Assembly

    Range
    64033709..64039001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_207349.1: Suppressed sequence

    Description
    NM_207349.1: This RefSeq was permanently suppressed because it is now thought that this gene does not encode a protein.
  2. NR_027686.1: Suppressed sequence

    Description
    NR_027686.1: This RefSeq was removed because it is now thought that this gene does encode a protein.
  3. NR_027687.1: Suppressed sequence

    Description
    NR_027687.1: This RefSeq was removed because it is now thought that this gene does encode a protein.
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