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LINC00303 long intergenic non-protein coding RNA 303 [ Homo sapiens (human) ]

Gene ID: 284573, updated on 17-Jun-2024

Summary

Official Symbol
LINC00303provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 303provided by HGNC
Primary source
HGNC:HGNC:26865
See related
Ensembl:ENSG00000176754 AllianceGenome:HGNC:26865
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C1orf157; NCRNA00303
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00303 in Genome Data Viewer
Location:
1q32.1
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (204032445..204041265, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (203296571..203305400, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (204001573..204010393, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene chromobox 1 pseudogene 3 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:203954123-203954818 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:203965665-203966228 Neighboring gene uncharacterized LOC105371689 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:203995579-203996128 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204035195-204035714 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:204037795-204038296 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:204042922-204043614 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204044309-204045000 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:204046628-204047556 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204047557-204048485 Neighboring gene Sharpr-MPRA regulatory region 2526 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204051273-204052200 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204056259-204056803 Neighboring gene SRY-box transcription factor 13 Neighboring gene HNF4 motif-containing MPRA enhancer 209 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204076334-204077177 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204077178-204078020 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204078021-204078864 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204094655-204095156 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204095157-204095656 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:204099007-204099510 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204099511-204100013 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204100030-204100566 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:204100567-204101102 Neighboring gene ethanolamine kinase 2 Neighboring gene estrogen receptor responsive lncRNA 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027902.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC096645
    Related
    ENST00000367207.7

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    204032445..204041265 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    203296571..203305400 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)