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C1orf167 chromosome 1 open reading frame 167 [ Homo sapiens (human) ]

Gene ID: 284498, updated on 5-Jan-2022

Summary

Official Symbol
C1orf167provided by HGNC
Official Full Name
chromosome 1 open reading frame 167provided by HGNC
Primary source
HGNC:HGNC:25262
See related
Ensembl:ENSG00000215910
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Implicated in coronary artery disease. [provided by Alliance of Genome Resources, Nov 2021]
Expression
Broad expression in testis (RPKM 7.7), lung (RPKM 3.1) and 24 other tissues See more
Orthologs
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Genomic context

See C1orf167 in Genome Data Viewer
Location:
1p36.22
Exon count:
26
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 1 NC_000001.11 (11762188..11790223)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (11822250..11849642)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene mitotic arrest deficient 2 like 2 Neighboring gene dorsal inhibitory axon guidance protein Neighboring gene angiotensin II receptor associated protein Neighboring gene atrophin-1-like Neighboring gene C1orf167 antisense RNA 1 Neighboring gene methylenetetrahydrofolate reductase Neighboring gene chloride voltage-gated channel 6 Neighboring gene VISTA enhancer hs2123 Neighboring gene NPPA antisense RNA 1 Neighboring gene natriuretic peptide A

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

Associated conditions

Description Tests
Common genetic loci influencing plasma homocysteine concentrations and their effect on risk of coronary artery disease.
GeneReviews: Not available

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • DKFZp434E1410, DKFZp434F1313

General protein information

Preferred Names
uncharacterized protein C1orf167

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001010881.2NP_001010881.1  uncharacterized protein C1orf167

    Status: VALIDATED

    Source sequence(s)
    AF398935, AL833920, AL833926, AL834308, AL953897, BC128091, HY031308, HY056181
    UniProtKB/Swiss-Prot
    Q5SNV9
    UniProtKB/TrEMBL
    A2VCK6, Q8NDG0
    Related
    ENSP00000510540.1, ENST00000688073.1
    Conserved Domains (1) summary
    pfam15736
    Location:9541418
    DUF4684; Domain of unknown function (DUF4684)

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p13 Primary Assembly

    Range
    11762188..11790223
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024446507.1XP_024302275.1  uncharacterized protein C1orf167 isoform X1

    Conserved Domains (1) summary
    pfam15736
    Location:9991436
    DUF4684; Domain of unknown function (DUF4684)
  2. XM_024446506.1XP_024302274.1  uncharacterized protein C1orf167 isoform X1

    Conserved Domains (1) summary
    pfam15736
    Location:9991436
    DUF4684; Domain of unknown function (DUF4684)
  3. XM_011541272.3XP_011539574.1  uncharacterized protein C1orf167 isoform X3

    Conserved Domains (1) summary
    pfam15736
    Location:9991463
    DUF4684; Domain of unknown function (DUF4684)
  4. XM_011541276.3XP_011539578.1  uncharacterized protein C1orf167 isoform X5

    Conserved Domains (1) summary
    pfam15736
    Location:9991329
    DUF4684; Domain of unknown function (DUF4684)
  5. XM_011541277.3XP_011539579.1  uncharacterized protein C1orf167 isoform X6

    Conserved Domains (1) summary
    pfam15736
    Location:9991400
    DUF4684; Domain of unknown function (DUF4684)
  6. XM_024446512.1XP_024302280.1  uncharacterized protein C1orf167 isoform X2

    Conserved Domains (1) summary
    pfam15736
    Location:9811418
    DUF4684; Domain of unknown function (DUF4684)
  7. XM_024446509.1XP_024302277.1  uncharacterized protein C1orf167 isoform X1

    Conserved Domains (1) summary
    pfam15736
    Location:9991436
    DUF4684; Domain of unknown function (DUF4684)
  8. XM_024446514.1XP_024302282.1  uncharacterized protein C1orf167 isoform X4

    Conserved Domains (1) summary
    pfam15736
    Location:9541361
    DUF4684; Domain of unknown function (DUF4684)
  9. XM_011541278.2XP_011539580.1  uncharacterized protein C1orf167 isoform X7

    Conserved Domains (1) summary
    pfam15736
    Location:9991404
    DUF4684; Domain of unknown function (DUF4684)
  10. XM_024446517.1XP_024302285.1  uncharacterized protein C1orf167 isoform X4

    Conserved Domains (1) summary
    pfam15736
    Location:9541361
    DUF4684; Domain of unknown function (DUF4684)
  11. XM_024446508.1XP_024302276.1  uncharacterized protein C1orf167 isoform X1

    Conserved Domains (1) summary
    pfam15736
    Location:9991436
    DUF4684; Domain of unknown function (DUF4684)
  12. XM_024446515.1XP_024302283.1  uncharacterized protein C1orf167 isoform X4

    Conserved Domains (1) summary
    pfam15736
    Location:9541361
    DUF4684; Domain of unknown function (DUF4684)
  13. XM_024446518.1XP_024302286.1  uncharacterized protein C1orf167 isoform X8

    Conserved Domains (1) summary
    pfam15736
    Location:426863
    DUF4684; Domain of unknown function (DUF4684)
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