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MBD3L5 methyl-CpG binding domain protein 3 like 5 [ Homo sapiens (human) ]

Gene ID: 284428, updated on 11-Jun-2021

Summary

Official Symbol
MBD3L5provided by HGNC
Official Full Name
methyl-CpG binding domain protein 3 like 5provided by HGNC
Primary source
HGNC:HGNC:37204
See related
Ensembl:ENSG00000237247
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more
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Genomic context

See MBD3L5 in Genome Data Viewer
Location:
19p13.2
Exon count:
2
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (7030578..7033011)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (7030589..7033022)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112268245 Neighboring gene methyl-CpG binding domain protein 3 like 2B Neighboring gene methyl-CpG binding domain protein 3 like 4 Neighboring gene methyl-CpG binding domain protein 3 like 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

General protein information

Preferred Names
putative methyl-CpG-binding domain protein 3-like 5
Names
MBD3-like protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001136507.2NP_001129979.1  putative methyl-CpG-binding domain protein 3-like 5

    See identical proteins and their annotated locations for NP_001129979.1

    Status: VALIDATED

    Source sequence(s)
    AC010606
    Consensus CDS
    CCDS45942.1
    UniProtKB/Swiss-Prot
    A6NJ08
    Related
    ENSP00000331435.4, ENST00000329753.5
    Conserved Domains (2) summary
    pfam14048
    Location:103193
    MBD_C; C-terminal domain of methyl-CpG binding protein 2 and 3
    pfam16564
    Location:4897
    MBDa; p55-binding region of Methyl-CpG-binding domain proteins MBD

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    7030578..7033011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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