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MIR7-3HG MIR7-3 host gene [ Homo sapiens (human) ]

Gene ID: 284424, updated on 13-May-2022

Summary

Official Symbol
MIR7-3HGprovided by HGNC
Official Full Name
MIR7-3 host geneprovided by HGNC
Primary source
HGNC:HGNC:30049
See related
Ensembl:ENSG00000176840 AllianceGenome:HGNC:30049
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
Huh7; PGSF1; C19orf30; LINC00306; NCRNA00306; uc002mbe.2
Expression
Biased expression in brain (RPKM 5.9), testis (RPKM 2.8) and 4 other tissues See more
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Genomic context

See MIR7-3HG in Genome Data Viewer
Location:
19p13.3
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (4769105..4772556)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (4754678..4758129)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (4769117..4772568)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105372250 Neighboring gene tRNA-Val (anticodon CAC) 3-1 Neighboring gene Sharpr-MPRA regulatory region 10046 Neighboring gene Sharpr-MPRA regulatory region 15136 Neighboring gene microRNA 7-3 Neighboring gene uncharacterized LOC124904620 Neighboring gene fem-1 homolog A

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Phenotypes

EBI GWAS Catalog

Description
Identification of novel genetic Loci associated with thyroid peroxidase antibodies and clinical thyroid disease.
EBI GWAS Catalog

General gene information

Markers

Other Names

  • MIR7-3 host gene (non-protein coding)
  • long intergenic non-protein coding RNA 306
  • pituitary gland specific factor 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027148.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AB058892, AB058893, BC117294, BE671262, DB051621
    Related
    ENST00000317292.9

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    4769105..4772556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    4754678..4758129
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_174947.2: Suppressed sequence

    Description
    NM_174947.2: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.