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SMIM24 small integral membrane protein 24 [ Homo sapiens (human) ]

Gene ID: 284422, updated on 13-May-2022

Summary

Official Symbol
SMIM24provided by HGNC
Official Full Name
small integral membrane protein 24provided by HGNC
Primary source
HGNC:HGNC:37244
See related
Ensembl:ENSG00000095932 AllianceGenome:HGNC:37244
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
MARDI; HSPC323; C19orf77
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in kidney (RPKM 301.3), duodenum (RPKM 292.3) and 4 other tissues See more
Orthologs
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Genomic context

See SMIM24 in Genome Data Viewer
Location:
19p13.3
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (3473986..3480525, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (3452142..3458692, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (3473984..3480523, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene CUGBP Elav-like family member 5 Neighboring gene uncharacterized LOC105372244 Neighboring gene skeletal muscle cis-regulatory module in NFIC intron Neighboring gene nuclear factor I C Neighboring gene uncharacterized LOC105372246 Neighboring gene uncharacterized LOC105372245 Neighboring gene small integral membrane protein 44 Neighboring gene deoxyhypusine hydroxylase

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
located_in integral component of membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
small integral membrane protein 24
Names
MAP17-related dimer
transmembrane protein C19orf77
transmembrane protein HSPC323

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001136503.2NP_001129975.1  small integral membrane protein 24 precursor

    See identical proteins and their annotated locations for NP_001129975.1

    Status: VALIDATED

    Source sequence(s)
    AC005551, BM769757, BU733823
    Consensus CDS
    CCDS45915.1
    UniProtKB/Swiss-Prot
    O75264
    Related
    ENSP00000215531.4, ENST00000215531.6
    Conserved Domains (1) summary
    pfam15807
    Location:16130
    MAP17; Membrane-associated protein 117 kDa, PDZK1-interacting protein 1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    3473986..3480525 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    3452142..3458692 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)