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SCGB2B2 secretoglobin family 2B member 2 [ Homo sapiens (human) ]

Gene ID: 284402, updated on 23-Nov-2021

Summary

Official Symbol
SCGB2B2provided by HGNC
Official Full Name
secretoglobin family 2B member 2provided by HGNC
Primary source
HGNC:HGNC:27616
See related
Ensembl:ENSG00000205209 MIM:615063
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
SCGBL; SCGB4A2
Expression
Low expression observed in reference dataset See more
Orthologs
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Genomic context

See SCGB2B2 in Genome Data Viewer
Location:
19q13.11
Exon count:
9
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (34585529..34677159, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (35081530..35085490, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene ribosomal protein S26 pseudogene 55 Neighboring gene zinc finger protein 807, pseudogene Neighboring gene uncharacterized LOC105372374 Neighboring gene secretoglobin family 1B member 2, pseudogene Neighboring gene zinc finger protein 530-like Neighboring gene secretoglobin family 2B member 3, pseudogene Neighboring gene secretoglobin family 1B member 3, pseudogene Neighboring gene zinc finger protein 302 Neighboring gene secretoglobin family 2B member 1, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
secretoglobin family 2B member 2
Names
secretoglobin-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025591.4NP_001020762.1  secretoglobin family 2B member 2 precursor

    See identical proteins and their annotated locations for NP_001020762.1

    Status: VALIDATED

    Source sequence(s)
    AC020910, AC022143, AK093495
    Consensus CDS
    CCDS32989.1
    UniProtKB/Swiss-Prot
    Q4G0G5
    Related
    ENSP00000469876.1, ENST00000601241.6
    Conserved Domains (1) summary
    pfam01099
    Location:3091
    Uteroglobin; Uteroglobin family

RNA

  1. NR_170946.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC020910, AC022143
  2. NR_170947.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC020910, AC022143
  3. NR_170948.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC020910, AC022143
  4. NR_170949.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC020910, AC022143
  5. NR_170950.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC020910, AC022143
  6. NR_170951.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC020910, AC022143

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    34585529..34677159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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