Format

Send to:

Choose Destination

SIGLEC17P sialic acid binding Ig like lectin 17, pseudogene [ Homo sapiens (human) ]

Gene ID: 284367, updated on 23-Nov-2021

Summary

Official Symbol
SIGLEC17Pprovided by HGNC
Official Full Name
sialic acid binding Ig like lectin 17, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:15604
See related
Ensembl:ENSG00000171101
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
HSPC078; SIGLECP2; SIGLECP3
Expression
Broad expression in lung (RPKM 3.9), spleen (RPKM 2.3) and 15 other tissues See more
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See SIGLEC17P in Genome Data Viewer
Location:
19q13.41
Exon count:
7
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 19 NC_000019.10 (51167328..51173524)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (51670585..51676780)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene sialic acid binding Ig like lectin 9 Neighboring gene sialic acid binding Ig like lectin 7 Neighboring gene uncharacterized LOC101928517 Neighboring gene sialic acid binding Ig like lectin 20, pseudogene Neighboring gene zinc finger DHHC-type palmitoyltransferase 7 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_047529.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longest transcript.
    Source sequence(s)
    AC063977, AK301336, BC041072
    Related
    ENST00000614626.1
  2. NR_047530.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal exon and uses an alternate splice site in the 3' region, compared to variant 1.
    Source sequence(s)
    AC063977, BC041072
    Related
    ENST00000618545.4
  3. NR_047531.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks an internal exon compared to variant 1.
    Source sequence(s)
    AC063977, AF150143, BC041072
    Related
    ENST00000611992.4

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p13 Primary Assembly

    Range
    51167328..51173524
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NR_002804.2: Suppressed sequence

    Description
    NR_002804.2: This RefSeq was permanently suppressed because it contains intronic sequence.
Support Center