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NKPD1 NTPase KAP family P-loop domain containing 1 [ Homo sapiens (human) ]

Gene ID: 284353, updated on 22-Sep-2022

Summary

Official Symbol
NKPD1provided by HGNC
Official Full Name
NTPase KAP family P-loop domain containing 1provided by HGNC
Primary source
HGNC:HGNC:24739
See related
Ensembl:ENSG00000179846 AllianceGenome:HGNC:24739
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in skin (RPKM 5.9) and testis (RPKM 0.4) See more
Orthologs
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Genomic context

See NKPD1 in Genome Data Viewer
Location:
19q13.32
Exon count:
6
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (45149744..45162841, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (47974875..47986113, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (45653002..45664240, complement)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene gem nuclear organelle associated protein 7 Neighboring gene GEMIN7 antisense RNA 1 Neighboring gene protein phosphatase 1 regulatory subunit 37 Neighboring gene eukaryotic translation initiation factor 5A pseudogene 3 Neighboring gene uncharacterized LOC105372420 Neighboring gene trafficking protein particle complex subunit 6A Neighboring gene biogenesis of lysosomal organelles complex 1 subunit 3 Neighboring gene exocyst complex component 3 like 2

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General gene information

Markers

Homology

Clone Names

  • FLJ33600, AC005757.7

Gene Ontology Provided by GOA

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
NTPase KAP family P-loop domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198478.4NP_940880.3  NTPase KAP family P-loop domain-containing protein 1

    See identical proteins and their annotated locations for NP_940880.3

    Status: VALIDATED

    Source sequence(s)
    AC005757
    UniProtKB/TrEMBL
    A0A7N4I390
    Related
    ENSP00000509174.1, ENST00000686631.1
    Conserved Domains (1) summary
    cl21455
    Location:259564
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    45149744..45162841 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011526805.3XP_011525107.1  NTPase KAP family P-loop domain-containing protein 1 isoform X3

    Conserved Domains (1) summary
    cl21455
    Location:84389
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
  2. XM_011526804.3XP_011525106.1  NTPase KAP family P-loop domain-containing protein 1 isoform X2

    Conserved Domains (1) summary
    cl21455
    Location:140445
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
  3. XM_011526799.3XP_011525101.1  NTPase KAP family P-loop domain-containing protein 1 isoform X1

    See identical proteins and their annotated locations for XP_011525101.1

    Conserved Domains (1) summary
    cl21455
    Location:286591
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    47974875..47986113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)