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LINC00868 long intergenic non-protein coding RNA 868 [ Homo sapiens (human) ]

Gene ID: 283994, updated on 13-May-2022

Summary

Official Symbol
LINC00868provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 868provided by HGNC
Primary source
HGNC:HGNC:27562
See related
Ensembl:ENSG00000267535 AllianceGenome:HGNC:27562
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C17orf52
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00868 in Genome Data Viewer
Location:
17q25.2
Exon count:
3
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (76856166..76861836)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (77748184..77753854)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (74852248..74857918)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene major facilitator superfamily domain containing 11 Neighboring gene long intergenic non-protein coding RNA 2080 Neighboring gene uncharacterized LOC107985089 Neighboring gene Sharpr-MPRA regulatory region 12785 Neighboring gene alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_135283.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript.
    Source sequence(s)
    AC016168
    Related
    ENST00000589708.1
  2. NR_135284.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an internal exon, resulting in a shorter transcript than variant 1.
    Source sequence(s)
    AC016168
    Related
    ENST00000589914.1

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    76856166..76861836
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    77748184..77753854
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)