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LINC00469 long intergenic non-protein coding RNA 469 [ Homo sapiens (human) ]

Gene ID: 283982, updated on 23-Nov-2021

Summary

Official Symbol
LINC00469provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 469provided by HGNC
Primary source
HGNC:HGNC:26863
Gene type
ncRNA
RefSeq status
PREDICTED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
C17orf54
Expression
Low expression observed in reference dataset See more
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Genomic context

See LINC00469 in Genome Data Viewer
Location:
17q25.1
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 17 NC_000017.11 (73749270..73828537, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (71745409..71824676, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene sidekick cell adhesion molecule 2 Neighboring gene uncharacterized LOC101928251 Neighboring gene uncharacterized LOC107985091 Neighboring gene uncharacterized LOC100134391 Neighboring gene long intergenic non-protein coding RNA 2092 Neighboring gene uncharacterized LOC107985081 Neighboring gene uncharacterized LOC105371888 Neighboring gene long intergenic non-protein coding RNA 2074

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Loci associated with N-glycosylation of human immunoglobulin G show pleiotropy with autoimmune diseases and haematological cancers.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027146.1 RNA Sequence

    Status: PREDICTED

    Source sequence(s)
    AC125421, AK097638, BC101215

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p13 Primary Assembly

    Range
    73749270..73828537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_182564.1: Suppressed sequence

    Description
    NM_182564.1: This RefSeq was permanently suppressed because currently there is support for the transcript but not for the protein.
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