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EXOC3L1 exocyst complex component 3 like 1 [ Homo sapiens (human) ]

Gene ID: 283849, updated on 22-Aug-2020

Summary

Official Symbol
EXOC3L1provided by HGNC
Official Full Name
exocyst complex component 3 like 1provided by HGNC
Primary source
HGNC:HGNC:27540
See related
Ensembl:ENSG00000179044 MIM:614117
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
EXOC3L
Expression
Biased expression in spleen (RPKM 14.8), placenta (RPKM 3.6) and 9 other tissues See more
Orthologs

Genomic context

See EXOC3L1 in Genome Data Viewer
Location:
16q22.1
Exon count:
14
Annotation release Status Assembly Chr Location
109.20200815 current GRCh38.p13 (GCF_000001405.39) 16 NC_000016.10 (67184379..67190136, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (67217652..67224112, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene F-box and leucine rich repeat protein 8 Neighboring gene heat shock transcription factor 4 Neighboring gene nucleolar protein 3 Neighboring gene KIAA0895 like Neighboring gene E2F transcription factor 4 Neighboring gene engulfment and cell motility 3 Neighboring gene microRNA 328

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

Associated conditions

Description Tests
Genome-wide association study of coronary heart disease and its risk factors in 8,090 African Americans: the NHLBI CARe Project.
GeneReviews: Not available

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • FLJ35539, FLJ35587, MGC88052

Gene Ontology Provided by GOA

Function Evidence Code Pubs
SNARE binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
molecular_function ND
No biological Data available
more info
 
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
exocyst localization IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
exocytosis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
exocytosis ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
peptide hormone secretion ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
Component Evidence Code Pubs
exocyst IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
exocyst ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
secretory granule ISS
Inferred from Sequence or Structural Similarity
more info
PubMed 
transport vesicle IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
exocyst complex component 3-like protein
Names
protein Jiangli

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_178516.4NP_848611.2  exocyst complex component 3-like protein

    See identical proteins and their annotated locations for NP_848611.2

    Status: VALIDATED

    Source sequence(s)
    AI796350, AK092858, DA945486
    Consensus CDS
    CCDS10832.1
    UniProtKB/Swiss-Prot
    Q86VI1
    UniProtKB/TrEMBL
    A0A024R6U6
    Related
    ENSP00000325674.6, ENST00000314586.11
    Conserved Domains (1) summary
    pfam06046
    Location:188722
    Sec6; Exocyst complex component Sec6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20200815

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p13 Primary Assembly

    Range
    67184379..67190136 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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