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GOLGA6L1 golgin A6 family like 1 [ Homo sapiens (human) ]

Gene ID: 283767, updated on 13-Mar-2020

Summary

Official Symbol
GOLGA6L1provided by HGNC
Official Full Name
golgin A6 family like 1provided by HGNC
Primary source
HGNC:HGNC:37444
See related
Ensembl:ENSG00000273976
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Restricted expression toward testis (RPKM 6.6) See more

Genomic context

See GOLGA6L1 in Genome Data Viewer
Location:
15q11.2
Exon count:
10
Annotation release Status Assembly Chr Location
109.20200228 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (23127066..23136822, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (22736246..22746002)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene engulfment and cell motility 2 pseudogene 1 Neighboring gene pectinesterase inhibitor 10-like Neighboring gene M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein) pseudogene Neighboring gene golgin A8 family member D, pseudogene Neighboring gene RNA, 7SL, cytoplasmic 106, pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

General protein information

Preferred Names
golgin subfamily A member 6-like protein 1
Names
golgi autoantigen, golgin subfamily a, 6-like 1

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001001413.3NP_001001413.3  golgin subfamily A member 6-like protein 1

    Status: VALIDATED

    Source sequence(s)
    AC116165
    Consensus CDS
    CCDS73699.1
    UniProtKB/TrEMBL
    A0A087WU96
    Related
    ENSP00000478478.1, ENST00000614055.2
    Conserved Domains (3) summary
    cl25716
    Location:150
    Amelogenin; Amelogenin
    cl25751
    Location:598
    DUF4045; Domain of unknown function (DUF4045)
    cl26511
    Location:185658
    Neuromodulin_N; Gap junction protein N-terminal region

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    23127066..23136822 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017022085.2XP_016877574.1  golgin subfamily A member 6-like protein 1 isoform X1

Reference GRCh38.p13 PATCHES

Genomic

  1. NW_021160017.1 Reference GRCh38.p13 PATCHES

    Range
    4021809..4031548 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_1

Genomic

  1. NT_187603.1 Reference GRCh38.p13 ALT_REF_LOCI_1

    Range
    227574..237330 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p13 ALT_REF_LOCI_2

Genomic

  1. NT_187659.1 Reference GRCh38.p13 ALT_REF_LOCI_2

    Range
    96576..106332 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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