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LINC00928 long intergenic non-protein coding RNA 928 [ Homo sapiens (human) ]

Gene ID: 283761, updated on 8-Jul-2019

Summary

Official Symbol
LINC00928provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 928provided by HGNC
Primary source
HGNC:HGNC:27535
See related
Ensembl:ENSG00000259218
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Low expression observed in reference dataset See more

Genomic context

See LINC00928 in Genome Data Viewer
Location:
15q26.1
Exon count:
4
Annotation release Status Assembly Chr Location
109.20190607 current GRCh38.p13 (GCF_000001405.39) 15 NC_000015.10 (89504930..89524034, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (90048161..90067265, complement)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105370964 Neighboring gene uncharacterized LOC112268153 Neighboring gene Rh family C glycoprotein Neighboring gene TOPBP1 interacting checkpoint and replication regulator Neighboring gene kinesin family member 7 Neighboring gene perilipin 1

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Related articles in PubMed

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Phenotypes

NHGRI GWAS Catalog

Description
Common genetic variants associated with resting oxygenation in chronic obstructive pulmonary disease.
NHGRI GWA Catalog

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027074.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) is the longer transcript, with a longer terminal exon.
    Source sequence(s)
    AC013391, BC039350, BC102005, BX103832
  2. NR_027075.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) includes an alternate exon and has a shorter terminal exon as compared to variant 1.
    Source sequence(s)
    BC039350, BC102003, BX103832
    Related
    ENST00000660770.1
  3. NR_027076.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) has a shorter terminal exon compared to variant 1.
    Source sequence(s)
    BC039350, BC102002, BC102004, BX103832
  4. NR_027077.1 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) has a shorter terminal exon compared to variant 1.
    Source sequence(s)
    BC039350, BC113965, BX103832
    Related
    ENST00000559967.2

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p13 Primary Assembly

    Range
    89504930..89524034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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