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LINC01146 long intergenic non-protein coding RNA 1146 [ Homo sapiens (human) ]

Gene ID: 283587, updated on 14-Dec-2021

Summary

Official Symbol
LINC01146provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 1146provided by HGNC
Primary source
HGNC:HGNC:49467
See related
Ensembl:ENSG00000258867
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in liver (RPKM 4.5) and prostate (RPKM 1.5) See more
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Genomic context

See LINC01146 in Genome Data Viewer
Location:
14q31.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 14 NC_000014.9 (88024550..88087346)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (88490894..88553690)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 835, pseudogene Neighboring gene uncharacterized LOC107984669 Neighboring gene G protein-coupled receptor 65 Neighboring gene long intergenic non-protein coding RNA 1147 Neighboring gene uncharacterized LOC107984699 Neighboring gene uncharacterized LOC105370613 Neighboring gene uncharacterized LOC105370612

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Phenotypes

EBI GWAS Catalog

Description
Genome-wide genetic and transcriptomic investigation of variation in antibody response to dietary antigens.
EBI GWAS Catalog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_046094.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL157955, BC029479
    Related
    ENST00000556033.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p13 Primary Assembly

    Range
    88024550..88087346
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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