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LINC00551 long intergenic non-protein coding RNA 551 [ Homo sapiens (human) ]

Gene ID: 283483, updated on 11-Jun-2021

Summary

Official Symbol
LINC00551provided by HGNC
Official Full Name
long intergenic non-protein coding RNA 551provided by HGNC
Primary source
HGNC:HGNC:43691
See related
Ensembl:ENSG00000272274
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Expression
Biased expression in kidney (RPKM 1.2), placenta (RPKM 0.9) and 5 other tissues See more
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Genomic context

See LINC00551 in Genome Data Viewer
Location:
13q33.3
Exon count:
4
Annotation release Status Assembly Chr Location
109.20210514 current GRCh38.p13 (GCF_000001405.39) 13 NC_000013.11 (106617810..106631658)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (107270158..107284006)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene arginine and glutamate rich 1 Neighboring gene uncharacterized LOC105370348 Neighboring gene long intergenic non-protein coding RNA 443 Neighboring gene ATP synthase membrane subunit c locus 1 pseudogene 5 Neighboring gene uncharacterized LOC107984627

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_051977.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AL442127
    Related
    ENST00000607593.1

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20210514

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p13 Primary Assembly

    Range
    106617810..106631658
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
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